DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and mah

DIOPT Version :10

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_651316.1 Gene:mah / 42988 FlyBaseID:FBgn0285912 Length:527 Species:Drosophila melanogaster


Alignment Length:373 Identity:90/373 - (24%)
Similarity:162/373 - (43%) Gaps:51/373 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 GMF-IVSLPFAVLHGGYWAIVAMVGIAHICCYTGKVLVQCLYEP---DPATGQMVRVRDSYVAIA 216
            |:| .|:||..::..||:.|:.::.|..:..||..:|.||....   ||:..|  :....|.|:|
  Fly    79 GIFPFVTLPALLVKLGYFGILLVLSIIILQIYTSFLLSQCWTMAELLDPSIQQ--KRNYPYAALA 141

  Fly   217 KVCFGPKLGARAVSIAQLIELLMTCILYVVVCGDLLAG-----TYPQGSFDSRSWMLFVGIFLLP 276
            ::.:||.: :..||:...:.:....:..||:....|.|     :..|.:|....|.:.||:.:.|
  Fly   142 ELAYGPYM-SLLVSVLLDLSIFAMAVPSVVMAAQNLEGVVLRMSAGQYNFSYCYWAIIVGLVICP 205

  Fly   277 MGFLKSLKMVSTLSFWCTMSHIVINAVILGYCLLQIGDWGWSKVRFSIDMENFPI---SLGVIVF 338
            :.:|.|.|.:..|:.......|||.| :|.:||......|......|:::..|..   |..::.|
  Fly   206 LMWLGSPKHMRGLAIIAVCVMIVIVA-LLWFCLFAAPAIGTPFEGISLELPGFLTVLNSYSILAF 269

  Fly   339 SYTSQIFLPTLEGNMIDRSKFNWMLDWSHIAAAVFKAGFGYICFLTFQNDT------QQVITNNL 397
            .:.....|.||:.:|..:|:.:|       ||.:   |....|.:......      ..:|.:||
  Fly   270 QFDIHPVLLTLQIDMKQKSQVSW-------AALI---GIAITCSVAIFGSIIAAYKFGSMIADNL 324

  Fly   398 HSQGFKGMVNFF--LVIKAL-LSYPLPYYAACELLE-RNFFRGPPKTKFPTIWNLDGELKVWGLG 458
             .|.....|.|:  |::.|| |.:.:...::...:: .|:|:.|....|..:.            
  Fly   325 -LQSLPTSVPFYVMLILMALQLCFSVTVASSAMFMQIENYFKLPESLSFKRML------------ 376

  Fly   459 FRVGVIVSTILMAIFIPHFSILMGFI-GSFTGTMLSFIWPCYFHIKIK 505
            .|..|:...:|:|.|:|.|..||..: |:.||.:: ||.|...:.:|:
  Fly   377 IRSSVLALEVLVAEFVPSFDALMDVVGGTITGPLV-FILPPLLYRRIR 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:444915 90/373 (24%)
mahNP_651316.1 SLC5-6-like_sbd 110..426 CDD:444915 81/342 (24%)

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