DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and CG32079

DIOPT Version :9

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_729645.3 Gene:CG32079 / 39230 FlyBaseID:FBgn0052079 Length:457 Species:Drosophila melanogaster


Alignment Length:442 Identity:91/442 - (20%)
Similarity:175/442 - (39%) Gaps:97/442 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 IDEFQAAWNVTNAIQGMFIVSLPFAVLHGGYW--AIVAMVGIAHICCYTGKVLVQCLYE------ 197
            :.:.:|..||.....|...:::|:|.|:.| |  .::....:.....|...:|:..:..      
  Fly    45 MSDLEAFINVLKCGFGTGCLAMPYAFLNSG-WLVGLICTFALGFFVLYAMHILLHHINNLGVQHN 108

  Fly   198 -PDPATGQMVRVRDSY-VAIAKVCFGPKL-GARAVSIAQLIELLM-------TCILYVVVC---- 248
             |      |:..|.:. ::|.|   ||.: ...:.....|:::|:       .|:..|.:.    
  Fly   109 MP------MISYRKAVELSIRK---GPSIFHFLSKPFGYLVDILLCAYHFGVDCVYVVFIAKSLK 164

  Fly   249 --GDLLAGTYPQGSFDSRSWMLFVGIFLLPMGFLKSLKMVSTLSFWCTMSHIVINAVIL-GYCLL 310
              ||:....:     |.|.:|..:...|:....:::||.:...|       |:.|.::| |||::
  Fly   165 HLGDMYLWVW-----DERLYMALIASPLILTFLIRNLKSLVPFS-------IISNILLLTGYCVI 217

  Fly   311 ------QIGDWGWSKVRFSIDMENFPISLGVIVFSYTSQIFLPTLEGNMIDRSKFNWM-----LD 364
                  .:.:  :..:.....:.||||..|.::||..|...:.:|..:|  |...:.|     |:
  Fly   218 LNYLFRDLPE--FEHLHAIQPLRNFPIFFGTVLFSIESVGVILSLGRSM--RKPESLMGTCGVLN 278

  Fly   365 WSHIAAAVFKAGFGYICFLTFQNDTQQVITNNLH--------SQGFKGMVNFFLVIKALLSYPLP 421
            ...|....|.|.||:..:..:..:|...|..|:.        :.|...:..||       ||.|.
  Fly   279 QGMIVVISFYAVFGFFGYWRYGENTSNSILQNMPQNDILPKLATGIFALAIFF-------SYALQ 336

  Fly   422 YYAACELLERNFFRGPPKTKFPTIWNLDGELKVWGLGFRVGVIVSTILMAIFIPHFSILMGFIGS 486
            .|...:::.||:..  |:.:       |..|:......|:.::::::|:||..|.|.:|:..:||
  Fly   337 GYVTVDIIWRNYLE--PELE-------DRYLRTVECLLRIALVIASVLVAIQYPDFGLLLSLVGS 392

  Fly   487 FTGTMLSFIWPCYFHIKIK-------GHLLDQKEIAKDYLIIGLGVLFGVIG 531
            |....|..|.|....|.::       |.:.    :.:..|.|.:|:..||.|
  Fly   393 FCLAQLGLILPGIVDICLRYEEDYGPGKIF----LIRSMLFICMGLAGGVAG 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:382020 91/439 (21%)
CG32079NP_729645.3 SLC5-6-like_sbd 46..446 CDD:294310 91/441 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468280
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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