DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and CG8785

DIOPT Version :9

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_610804.1 Gene:CG8785 / 36391 FlyBaseID:FBgn0033760 Length:474 Species:Drosophila melanogaster


Alignment Length:457 Identity:93/457 - (20%)
Similarity:177/457 - (38%) Gaps:102/457 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 GEGGGGCKIDEFQAAWNVTNAIQGMFIVSLPFAVLHGGY---WAIVAMVGIAHICCYTGKVLVQC 194
            |...||       |..::..:..|..|:::|.|..:.|.   .|:..:||.  :|.:...:||:.
  Fly    62 GASAGG-------ALAHLLKSSLGTGILAMPMAFHNAGLAFGMAMTLIVGF--LCTHCVHILVKT 117

  Fly   195 LYEPDPATGQMVRVRDSYVA-------IAKVC-FGPKLGARAVS--IAQLIELLMTCILYVVVC- 248
            .::         ..||:.|:       ..||. :||| |.|..|  ..|.:::.:....|...| 
  Fly   118 SHD---------ICRDAKVSALGFAETAEKVFEYGPK-GMRPYSNFAKQFVDIGLMATYYAAACV 172

  Fly   249 ---------GDLLAGTYPQGSFDSR-SW--MLFVGIFLLP---MGFLKSLKMVSTLSFWCTMSHI 298
                     .|::       ::|.: :|  .:::.:.::|   :|.::.||.:...|....:..:
  Fly   173 YIVFIATSFHDVI-------NYDLKINWDVRIYIALTVIPCLLIGQIRDLKWLVPFSMMANIFIV 230

  Fly   299 VINAVILGYCLLQIGDWGWSKVRFSIDMENFPISLGVIVFSYTSQIFLPTLEGNMIDRSKF---N 360
            |..|:.|.|...:  ...:|.........:.|:....::|:......:..:|.:|.....|   .
  Fly   231 VTFAITLYYMFDE--PLVYSDKPLIAKAAHIPLFFATVIFAMEGIGVVMPVENSMRKPQHFLGCP 293

  Fly   361 WMLDWSHIAAAVFKAGFGYICFLTFQNDTQQVITNNLHSQGFKG-MVNFFLVIKALLSYPLPYYA 424
            .:|:.:.:......|..|:..::.|.:..:..||.||....:.| .....:.:..|.::.|.:|.
  Fly   294 GVLNIAMVTVVSLYAIIGFFGYVRFGDQVRGSITLNLPEGAWLGDTAKLLMAVAILFTFGLQFYV 358

  Fly   425 ACELLERNFFRGPPKTKF-PTIWNLDGELKVWGLGFRVGVIVSTILMAIFIPH------------ 476
            ..|:|.|..     ..|| |...|:...|      .|.|:|:.:..:|..||:            
  Fly   359 PNEILWRKI-----SHKFSPEKHNITQIL------LRSGIILLSGGVAAAIPNLEPFISLVGAVF 412

  Fly   477 FSILMGFIGSFTGTMLSFIWPCYFHIKIKGHLLDQKEIAKDYLI--IGLGVLFGVIGIYDSGNAL 539
            ||:|..|:.||..|:  ::||            |:..:.|..|:  |.||| |.::.:.....|.
  Fly   413 FSLLGIFVPSFVETV--YLWP------------DRLGVCKWKLVKNIFLGV-FSILALVAGAVAS 462

  Fly   540 IN 541
            ||
  Fly   463 IN 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:382020 87/436 (20%)
CG8785NP_610804.1 SdaC 60..457 CDD:223884 90/448 (20%)
SLC5-6-like_sbd 62..463 CDD:294310 91/454 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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