DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and Slc38a11

DIOPT Version :9

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_001363948.1 Gene:Slc38a11 / 362141 RGDID:1306005 Length:464 Species:Rattus norvegicus


Alignment Length:410 Identity:91/410 - (22%)
Similarity:166/410 - (40%) Gaps:72/410 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 SEGSSFVCEGEGGGGCKIDEFQAAWNVTNAIQGMFIVSLPFAVLHGGY-WAIVAMVGIAHICCYT 187
            |:..|.|...|.||  |..:..|.:||.|::.|..|:.||:::...|: ..|:.:..:::|..::
  Rat    19 SDRESLVSGHEHGG--KSSQSAAVFNVVNSVIGSGIIGLPYSMKQAGFPLGILLLFWVSYITDFS 81

  Fly   188 GKVLVQCLYEPDPATGQMVRVRDSYVAIAKVCFG-PKLGARAVSIAQLIELLMTCILYVVVCGDL 251
            ..:|::         |..:...|||.::....|| |  |...:|..|.:...:..|.|.::.||.
  Rat    82 LVLLIK---------GGALSGTDSYQSLVNKTFGFP--GYLLLSTLQFMYPFIAMISYNIITGDT 135

  Fly   252 LA-------GTYPQGSFDSRSWMLFVGIF--LLPMGFLKSLKMVSTLSFWCTMSHIVINAVILGY 307
            |:       |..|...|.||.:::.|...  .||:...:.:..:..:||..|    ::.|||||.
  Rat   136 LSKVFQRLPGVDPGSWFISRHFIIVVSTVTCTLPLSLYRDIAKLGKISFIST----ILTAVILGV 196

  Fly   308 CL---LQIG------DWGWSKVRFSIDMENFPISLGVIVFSYTSQIFLPTLEGNMIDRSKFNW-M 362
            .:   :.:|      |..|...|     .|...::||:.|::........:.|::.:.:...| .
  Rat   197 VVTRTISLGPNIPKTDNAWVFAR-----PNAIQAIGVMSFAFICHHNCFLVYGSLEEPTVAKWRR 256

  Fly   363 LDWSHIAAAVFKAGFGYIC-------FLTFQNDTQ-QVITNNLHSQGFKGMVNFFLVIKALLSYP 419
            :..:.|..:||      ||       :.||...|| .:..|...|........|...|..:|:||
  Rat   257 VIHTSILVSVF------ICVLFATCGYFTFTGFTQGDLFENYCRSDDLVTFGRFCYGITVILTYP 315

  Fly   420 LPYYAACELLERNFFRGPPKTKFPTIWNLDGELKVWGLGFRVGVIVSTILMAIFIPHFSILMGFI 484
            :..:...|::...||.|...:             |:.:.....::.:..|:::.|....|::...
  Rat   316 IECFVTREVITNVFFGGALSS-------------VFHVTLTAAIVTAATLISLLIDCLGIVLELN 367

  Fly   485 GSFTGTMLSFIWP--CYFHI 502
            |......|.||.|  ||..:
  Rat   368 GVLCAAPLIFIIPSACYLKL 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:382020 84/390 (22%)
Slc38a11NP_001363948.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..34 6/16 (38%)
SLC5-6-like_sbd 32..420 CDD:382020 86/397 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X361
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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