DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and CG32081

DIOPT Version :9

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_729646.1 Gene:CG32081 / 326194 FlyBaseID:FBgn0052081 Length:471 Species:Drosophila melanogaster


Alignment Length:435 Identity:84/435 - (19%)
Similarity:177/435 - (40%) Gaps:77/435 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 IDEFQAAWNVTNAIQGMFIVSLPFAVLHGG-YWAIVAMVGIAHICCYTGKVLVQCLYEPDPATGQ 204
            |.:..|.:::...:.|..::::|.:..:.| ...|:.:|.:..:..:..::|:.|:.|    ..:
  Fly    19 ISDIGAFFSLLKCVVGTGVMAIPLSFNYAGIVTGIILLVSVCFMLIHGMQMLIICMIE----CSR 79

  Fly   205 MVRVRDSYVAIAKVCF---GP-------KLGARAVSIAQLIELLMTCILYVVVCGDLLAGTYPQ- 258
            .:::..:...:|.|..   ||       |.|...|...........|::|.|    .:|.|..| 
  Fly    80 RMQIGYATYPVAMVYSFDQGPRFFKYISKAGRYIVDGVLAFSQFGVCVVYNV----FVAATLKQL 140

  Fly   259 GSF-----DSRSWMLFVGIFLLPMGFLKSLKMVSTLSFWCTMSHIVINAVILGYCLLQIGDWGWS 318
            ..|     |.|.::..:.:.|:|...::.||.:...:...::......::::.|..:.:......
  Fly   141 VDFYWVVADLRIYIAVIALCLIPPFQIRKLKYLVPFNILASILIYTGFSLMMYYLFVDLPPITER 205

  Fly   319 KVRFSIDMENFPISLGVIVFSYTSQIFLPTLEGNMI-DRSKFNW--MLDWSHIAAAVFKAGFGYI 380
            .:.|. .::..|:..|:.:||.||...:..:|..|. .|....|  :||.:.:...:....||.:
  Fly   206 NILFG-RIDKIPLFFGIALFSITSVGVMLAVEATMAKPRHYLGWFGILDRAILLVIISYVTFGLM 269

  Fly   381 CFLTFQNDTQ-----QVITNNLHSQGFKGMVNFFLVIKALLSYPLPYYAACELLERNFFRGPPKT 440
            .:..:.::|.     .:.|:.:.||..||    |:.....|:|||..:...:::..:|       
  Fly   270 GYWRYGDETAGSISLNIPTDEVLSQVAKG----FIAAAIFLTYPLAGFVIIDIIMNHF------- 323

  Fly   441 KFPTIWNLDGELKVWGLG---FRVGVIVSTILMAIFIPHFSILMGFIGSFTGTMLSFIWPCYFHI 502
                 ||.:|:|....|.   .|...:|...:.||..|:...|:..:|:.|.::|:.::|....|
  Fly   324 -----WNKNGDLPNAALKESILRACTVVLICITAIIAPNLGPLLSLVGALTISLLNLVFPALIEI 383

  Fly   503 -----------KIKGHLLDQKEIAKD--YLIIGL-----GVLFGV 529
                       |:|..|:      ||  |:|:|:     |.:|.:
  Fly   384 CLYYPPEYNYGKLKWVLV------KDIFYVIVGILILVQGTVFSI 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:382020 83/432 (19%)
CG32081NP_729646.1 SLC5-6-like_sbd 17..422 CDD:294310 84/433 (19%)
SdaC 20..415 CDD:223884 81/425 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468283
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.830

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