DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and Slc38a7

DIOPT Version :9

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_001003705.1 Gene:Slc38a7 / 291840 RGDID:1303268 Length:463 Species:Rattus norvegicus


Alignment Length:469 Identity:100/469 - (21%)
Similarity:173/469 - (36%) Gaps:98/469 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 EGEGGGG----CKIDEFQAAWNVTNAIQGMFIVSLPFAV-LHGGYWAIVAM-VGIAHICCYTGKV 190
            |||...|    .......|.:.|.||..|..:::.|.|. ..||..|.:|: :|:.........:
  Rat    38 EGEASPGDPDSGTTSTLGAVFIVVNACLGAGLLNFPAAFSTAGGVAAGIALQMGMLVFIISGLVI 102

  Fly   191 LVQCLYEPDPATGQMVRVRDSYVAIAKVCFGPKLGARAVSIAQLIELLMTCILYVVVCGD----- 250
            |..|....:..|.|.|        :..||  .||......||..:....|||.::::.||     
  Rat   103 LAYCSQASNERTYQEV--------VWAVC--GKLTGVLCEIAIAVYTFGTCIAFLIIIGDQQDKI 157

  Fly   251 -LLAGTYPQGSFDSRSW--------MLFVGIFLLPM------GFLKSLKMVSTLSFWCTMSHIVI 300
             .:....|.|:..| .|        .|...:|:||:      ||.|....:|.:..|...:.::|
  Rat   158 IAVMAKEPDGASGS-PWYTDRKFTISLTAFLFILPLSIPKEIGFQKYASSLSVVGTWYVTAIVII 221

  Fly   301 NAVILGYCLLQIGDWGWSKVRFSIDMENFPIS-------LGVIVFSYTSQIFLPTLEGNMIDRSK 358
            ..:           |...::|.. |:...|.|       :..|.|.:...:....:..:|.....
  Rat   222 KYI-----------WPDKEMRPG-DILTRPASWMAVFNAMPTICFGFQCHVSSVPVFNSMRQPQV 274

  Fly   359 FNW-------MLDWSHIAAAVFKAGFGYICFLTFQNDTQQVITNNLHSQGFK-GMVNFFLVIKAL 415
            ..|       |:    ||.||: .|.|...||||.......:..:..|:... .:...|:::..|
  Rat   275 KTWGGVVTAAMV----IALAVY-MGTGICGFLTFGAAVDPDVLRSYPSEDVAVAVARAFIILSVL 334

  Fly   416 LSYPLPYYAACELLERNF--FRGPP----------KTKFPTIWNLDGELKVWGLGFRVGVIVSTI 468
            .|||:.::....::|..:  ::|.|          :....|:        ||        .:.|:
  Rat   335 TSYPILHFCGRAVVEGLWLRYKGTPVEEDVGRERRRRVLQTL--------VW--------FLLTL 383

  Fly   469 LMAIFIPHFSILMGFIGSFTGTMLSFIWPCYFHIKIKGHLLDQKEIAKDYLIIGLGVLFGVIGIY 533
            |:|:|||....::..||......: ||:|....|:.|...:::.:.|..:.::..|||...:|.:
  Rat   384 LLALFIPDIGKVISVIGGLAACFI-FIFPGLCLIQAKLSEMEEVKPASWWALVSYGVLLVTLGAF 447

  Fly   534 DSGNALINAFEIGL 547
            ..|....||..:.|
  Rat   448 IFGQTTANAVFVDL 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:382020 92/437 (21%)
Slc38a7NP_001003705.1 SLC5-6-like_sbd 49..458 CDD:382020 95/453 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352541
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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