DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment VGAT and Slc38a7

DIOPT Version :9

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_766346.1 Gene:Slc38a7 / 234595 MGIID:2679005 Length:463 Species:Mus musculus


Alignment Length:569 Identity:111/569 - (19%)
Similarity:196/569 - (34%) Gaps:160/569 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 QIPERKDYEQPPGSTAQQHHHSQQAQHKAMEAGMDGGDTTEMSSNPFRNAGSWTNDGEGG-GDGD 92
            |:....||.:...||                   |.|:...:..:|..:... .::||.. ||.|
Mouse     3 QVSINSDYSEWASST-------------------DAGERARLLQSPCVDVVP-KSEGEASPGDPD 47

  Fly    93 GEYRNEYQSTSFNEYDGRYQQTDGFRQGSIASEGSSFVCEGEGGGGCKIDEFQAAWNVTNAIQGM 157
                                      .|:.::.|:.|:                   |.||..|.
Mouse    48 --------------------------SGTTSTLGAVFI-------------------VVNACLGA 67

  Fly   158 FIVSLPFAV-LHGGYWAIVAM-VGIAHICCYTGKVLVQCLYEPDPATGQMVRVRDSYVAIAKVCF 220
            .:::.|.|. ..||..|.:|: :|:.........:|..|....:..|.|.|        :..|| 
Mouse    68 GLLNFPAAFSTAGGVAAGIALQMGMLVFIISGLVILAYCSQASNERTYQEV--------VWAVC- 123

  Fly   221 GPKLGARAVSIAQLIELLMTCILYVVVCGD------LLAGTYPQGSFDSRSW--------MLFVG 271
             .||......:|..:....|||.::::.||      .:....|.|:..| .|        .|...
Mouse   124 -GKLTGVLCEVAIAVYTFGTCIAFLIIIGDQQDKIIAVMSKEPDGASGS-PWYTDRKFTISLTAF 186

  Fly   272 IFLLPM------GFLKSLKMVSTLSFWCTMSHIVINAVILGYCLLQIGDWGWSKVRFSIDMENFP 330
            :|:||:      ||.|....:|.:..|...:.|:|..:           |...::|.. |:...|
Mouse   187 LFILPLSIPKEIGFQKYASFLSVVGTWYVTAIIIIKYI-----------WPDKEMRPG-DILTRP 239

  Fly   331 IS-------LGVIVFSYTSQIFLPTLEGNMIDRSKFNW-------MLDWSHIAAAVFKAGFGYIC 381
            .|       :..|.|.:...:....:..:|.......|       |:    ||.||: .|.|...
Mouse   240 ASWMAVFNAMPTICFGFQCHVSSVPVFNSMRQPEVKTWGGVVTAAMV----IALAVY-MGTGICG 299

  Fly   382 FLTFQNDTQQVITNNLHSQGFK-GMVNFFLVIKALLSYPLPYYAACELLERNF--FRGPP----- 438
            ||||.......:..:..|:... .:...|:::..|.|||:.::....::|..:  ::|.|     
Mouse   300 FLTFGAAVDPDVLRSYPSEDVAVAVARAFIILSVLTSYPILHFCGRAVVEGLWLRYKGMPVEEDV 364

  Fly   439 -----KTKFPTIWNLDGELKVWGLGFRVGVIVSTILMAIFIPHFSILMGFIGSFTGTMLSFIWPC 498
                 :....|:        ||        .:.|:|:|:|||....::..||......: ||:|.
Mouse   365 GRERRRRVLQTL--------VW--------FLLTLLLALFIPDIGKVISVIGGLAACFI-FIFPG 412

  Fly   499 YFHIKIKGHLLDQKEIAKDYLIIGLGVLFGVIGIYDSGNALINAFEIGL 547
            ...|:.|...:::.:.|..:.::..|||...:|.:..|....||..:.|
Mouse   413 LCLIQAKLSEMEEVKPASWWALVSYGVLLVTLGAFIFGQTTANAIFVDL 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:382020 91/437 (21%)
Slc38a7NP_766346.1 SLC5-6-like_sbd 49..458 CDD:382020 97/472 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848933
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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