DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and Slc32a1

DIOPT Version :10

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_033534.2 Gene:Slc32a1 / 22348 MGIID:1194488 Length:525 Species:Mus musculus


Alignment Length:163 Identity:34/163 - (20%)
Similarity:52/163 - (31%) Gaps:52/163 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   405 ETPTKPKDSEE-PNLTLQDEETSQSEHSL-----------KICEDSFSDDNTKDSQSKDAPASVQ 457
            :|.|:|...:: |.|..:|.:......||           .....|:.|::|:....|.....|.
Mouse    38 DTMTRPFSGKKLPVLAWKDVQRETRLFSLLSGMRMFGLGRLFTRKSWLDEHTEPCYWKITKVKVD 102

  Fly   458 DSPSKMKGLTDASSCSVKSDDG---------GKNVPATPADDK----------KDEQ-----VPP 498
            .:...|             |.|         ||..|.....||          |.|:     ..|
Mouse   103 YTAENM-------------DHGKAWGVLTFRGKEEPKEREVDKVMYHDWRLVPKHEEEEFRRCEP 154

  Fly   499 EPEPEAANDEQKPEEKEM---EETKEEKVQEDT 528
            .|||.|.:....|..:.|   ::.||:.|:..|
Mouse   155 VPEPAARSVRYPPLLRAMILAQQAKEQGVEVST 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:444915 34/163 (21%)
Slc32a1NP_033534.2 Aa_trans 115..512 CDD:279788 18/73 (25%)

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