DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and Slc36a1

DIOPT Version :10

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_694779.3 Gene:Slc36a1 / 215335 MGIID:2445299 Length:475 Species:Mus musculus


Alignment Length:511 Identity:114/511 - (22%)
Similarity:191/511 - (37%) Gaps:102/511 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 MSSNPFRNAGSWTNDGEGGGDGDGEYRNEYQSTSFNEYDGRYQQTDGFRQGSI--ASEGSSFVCE 132
            ||:...||                |..::|.||..:..:...:....|..||.  ..|.||... 
Mouse     1 MSTQRLRN----------------EDYHDYSSTDVSPEESPSEGLGSFSPGSYQRLGENSSMTW- 48

  Fly   133 GEGGGGCKIDEFQAAWNVTNAIQGMFIVSLPFAVLHGGYW---AIVAMVGIAHICCYTGKVLVQC 194
                       ||...::.....|..::.||.||.:.|..   ..:.::||..:.|.  .:||:|
Mouse    49 -----------FQTLIHLLKGNIGTGLLGLPLAVKNAGLLLGPLSLLVIGIVAVHCM--GILVKC 100

  Fly   195 LY---------------------EPDPATGQMVRVRDSYVAIAKVCFGPKLGARAVSIAQLIELL 238
            .:                     |..|:|  .||....:            |.|.|....::..|
Mouse   101 AHHLCRRLNKPFLDYGDTVMYGLECSPST--WVRNHSHW------------GRRIVDFFLIVTQL 151

  Fly   239 MTCILYVVVCGD-------LLAGT----------YPQGSFDSRSWMLFVGIFLLPMGFLKSLKMV 286
            ..|.:|.|...|       ...||          .|..:.|||.:||....||:.:.|:::|:::
Mouse   152 GFCCVYFVFLADNFKQVIEAANGTTTNCNNNVTVIPTPTMDSRLYMLSFLPFLVLLSFIRNLRVL 216

  Fly   287 STLSFWCTMSHIVINAVILGYCLLQIGDWGWSKVRFSIDMENFPISLGVIVFSYTS-QIFLPTLE 350
            |..|....:|..|...:|..:.:.:|.|  .|.:......:.:|:..|..:|::.. .:.|| ||
Mouse   217 SIFSLLANISMFVSLIMIYQFIVQRIPD--PSHLPLVAPWKTYPLFFGTAIFAFEGIGVVLP-LE 278

  Fly   351 GNMIDRSKFNWMLDWSHIAAAVFKAGFGYICFLTFQNDTQQVITNNLHSQGFKGMVNFFLVIKAL 415
            ..|.|..||..:|........|.....|.:.:|.|..:.:..||.||.:......|.....|...
Mouse   279 NKMKDSQKFPLILYLGMAIITVLYISLGSLGYLQFGANIKGSITLNLPNCWLYQSVKLLYSIGIF 343

  Fly   416 LSYPLPYYAACELLERNFFRGPPKTKFPTIWNLDGELKVWGLGFRVGVIVSTILMAIFIPHFSIL 480
            .:|.|.:|.|.|::.....     ::.|..:.|..:|.|     |..::..|.::||.||...::
Mouse   344 FTYALQFYVAAEIIIPAIV-----SRVPEHFELMVDLCV-----RTAMVCVTCVLAILIPRLDLV 398

  Fly   481 MGFIGSFTGTMLSFIWPCYFH-IKIKGHLLDQKEIAKDYLIIGLGVLFGVIGIYDS 535
            :..:||.:.:.|:.|.|.... :...|..:....:.||.||..||.:..|:|.|:|
Mouse   399 ISLVGSVSSSALALIIPPLLEVVTYYGEGISPLTVTKDALISILGFVGFVVGTYES 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:444915 98/431 (23%)
Slc36a1NP_694779.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32 8/46 (17%)
SLC5-6-like_sbd 47..452 CDD:444915 98/445 (22%)

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