DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and Slc36a3

DIOPT Version :9

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_758462.2 Gene:Slc36a3 / 215332 MGIID:2665001 Length:477 Species:Mus musculus


Alignment Length:438 Identity:92/438 - (21%)
Similarity:161/438 - (36%) Gaps:103/438 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 GMFIVSLPFAVLHGGYW-AIVAMVGIAHICCYTGKVLVQCLYEPDPATGQMVRVRDSYVAI---- 215
            |...:.||.||.:.|.. ..|:::.|..:..:...:|:.|      |.....|::.|:|..    
Mouse    65 GTGFLGLPLAVKNAGLLVGPVSLLAIGALTVHCMDILLNC------ACHLTQRLQRSFVNYEETT 123

  Fly   216 ---AKVCFGPKL------GARAVSIAQLIELLMTCILYVVVCGDLLAGTYPQGSF---------- 261
               .:.|..|.|      |...||...::..|..|.:|.:...|.|.....:..|          
Mouse   124 MYSLETCPSPWLRTHSVWGRYVVSFLLIVTQLGFCSVYFMFLADNLQQIMEEAHFTSNVCQPRQS 188

  Fly   262 -------DSRSWMLFVGIFLLPMGFLKSLKMVSTLSFWCTMSHIVINAVILGYCLLQ-------- 311
                   |:|.:||.:..||:.:..:::.:::|..|...|::.:...|:|..| |:|        
Mouse   189 LVMTSILDTRFYMLTILPFLILLVLIQNPQVLSIFSTLATITTLSSLALIFEY-LIQTPHHSNLP 252

  Fly   312 -IGDWGWSKVRFSIDMENFPISLGVIVFSYTSQIFLPTLEGNMIDRSKFNWMLDWSHIAAAVFKA 375
             :.:|           :.|.:..|..:|::.....:..|:..|....:|          .||...
Mouse   253 LVANW-----------KTFLLFFGTAIFTFEGVGMVLPLKSQMKSPQQF----------PAVLYL 296

  Fly   376 G-----FGYIC-----FLTFQNDTQQVITNNLHSQGFKGMVNFFLVIKALLSYPLPYYAACELLE 430
            |     |.|||     ::.|..|||..||.||........|.....:....:|.|.::...|:: 
Mouse   297 GMSFVIFLYICLGTLGYMKFGTDTQASITLNLPICWLYQSVKLMYSVGIFFTYALQFHVPAEII- 360

  Fly   431 RNFFRGPPKTKFPTI-------WNLDGELKVWGLGFRVGVIVSTILMAIFIPHFSILMGFIGSFT 488
                       .|.:       |.|..:|.|     |..::..|...|:.||...:::..:||.:
Mouse   361 -----------VPYVVSRVSENWALFVDLTV-----RTALVCLTCFSAVLIPRLDLVISLVGSVS 409

  Fly   489 GTMLSFIWPCYFHI-KIKGHLLDQKEIAKDYLIIGLGVLFGVIGIYDS 535
            .:.|:.|.|....| ......:....|.||.:|..||:|..|:|.|.:
Mouse   410 SSALAIIIPPLLEIATFYSENISCATIVKDIMISILGLLGCVLGTYQA 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:382020 91/434 (21%)
Slc36a3NP_758462.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 19..43
SLC5-6-like_sbd 52..458 CDD:382020 92/438 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848935
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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