DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment VGAT and Slc38a5

DIOPT Version :10

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_766067.2 Gene:Slc38a5 / 209837 MGIID:2148066 Length:479 Species:Mus musculus


Alignment Length:504 Identity:106/504 - (21%)
Similarity:207/504 - (41%) Gaps:127/504 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 GRYQQTDGF----RQGSIASEGSSFV-CEGEGGGGCKIDEFQAAWNVTNAIQGMFIVSLPFAVLH 168
            |..|:.:||    |..:...:...|: .||:...|..:      :|::|||.|..|:.|.:|:.|
Mouse    27 GYRQEREGFLPTTRNPATGRKPVQFLDFEGKTSFGMSV------FNLSNAIMGSGILGLAYAMAH 85

  Fly   169 GG-YWAIVAMVGIAHICCYTGKVLVQCLYEPDPATGQMVRVRDSYVAIAKVCFGPKLGARAVSIA 232
            .| .:.:..::.||.:..|:..:|:.|        ..:|.:| :|..:.:..|||   |..|.:|
Mouse    86 TGVIFFLALLLCIALLSSYSIHLLLTC--------ASVVGIR-AYEQLGQRAFGP---AGKVVVA 138

  Fly   233 QLIEL----LMTCILYVVVCG-DLLAGTY----PQGSFDSRSWMLFVGI---FLLPMGFLKSLKM 285
            .:|.|    .|:..|:::... .|:.||:    |:|.:..:..:|.:.:   .:||:..:|.|..
Mouse   139 IIICLHNVGAMSSYLFIIKSELPLVIGTFLHMDPEGDWFLKGNLLIILVSLLIILPLALMKHLGY 203

  Fly   286 V---STLSFWCTMSHIVINAVILGYCLLQIG--------------------DWGWSKVRFSIDME 327
            :   |:||..|.:..::  :||  |...|||                    :.......|::|.:
Mouse   204 LGYTSSLSLTCMLFFLI--SVI--YKKFQIGCDVSHNDTVVEAEQAPLQAFNSSCEAELFTVDSQ 264

  Fly   328 NFPISLGVIVFSYT---------SQIFLPTLEGNMIDRSKFNWMLDWSHIAAAVF-----KAGFG 378
             ...::.::.|::.         :::..||       :.:...:.:.|  ..|:|     .|.||
Mouse   265 -MSYTVPIMAFAFVCHPEVLPIYTELCRPT-------QRRMQAVANMS--IGAMFIMYGLTATFG 319

  Fly   379 YICFLTFQNDTQQVITNNLHSQGFKGM----VNFFLVIKALLSYPLPYYAACELLERNFFRGPPK 439
            |:.|.:    |.:.....:::|  :.|    |...:::...|:.|:..:.....|::..|   |.
Mouse   320 YLTFYS----TVKAEMLEMYTQ--EDMLILCVRLAVLLAVTLTVPVVLFPIRRALQQLLF---PS 375

  Fly   440 TKFPTIWNLDGELKVWGLGFRVGVIVSTILMAIFIPHFSILMGFIGSFTGTMLSFIWPCYFHIKI 504
            ..|.  |     |:...:...:.::|:  ::.|.:|....:.|||||.:...|.||.|..|:::|
Mouse   376 KAFS--W-----LRHVAIALILLILVN--ILVICVPTIRDIFGFIGSTSAPSLIFILPSVFYLRI 431

  Fly   505 ----KGHLLDQKEIAKDYLIIGLGVLFGVIGIYDSGNALINAFEIGLPF 549
                ...|....:|.        .:.|||:|:      |..|..:|..|
Mouse   432 VPTEVEPLFSWPKIQ--------ALCFGVLGV------LFMAISLGFMF 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:444915 93/446 (21%)
Slc38a5NP_766067.2 SLC5-6-like_sbd 56..466 CDD:444915 98/473 (21%)

Return to query results.
Submit another query.