DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and SLC36A1

DIOPT Version :9

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:XP_011535882.1 Gene:SLC36A1 / 206358 HGNCID:18761 Length:482 Species:Homo sapiens


Alignment Length:491 Identity:113/491 - (23%)
Similarity:190/491 - (38%) Gaps:83/491 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 RNE-YQSTSFNEYDGRYQQTDGFRQGSIASEGS--SFVCEGEGGGGCKIDEFQAAWNVTNAIQGM 157
            ||| |...|..:.......::|.  .:::|.||  .|      |.......||...::.....|.
Human    13 RNEDYHDYSSTDVSPEESPSEGL--NNLSSPGSYQRF------GQSNSTTWFQTLIHLLKGNIGT 69

  Fly   158 FIVSLPFAVLHGGYWAIV------AMVGIAHICCYTGKVLVQCLYEPDPATGQMVRVRDSYVAIA 216
            .::.||.||.:.|   ||      .::||..:.|.  .:||:|.:.      ...|:..|:|...
Human    70 GLLGLPLAVKNAG---IVMGPISLLIIGIVAVHCM--GILVKCAHH------FCRRLNKSFVDYG 123

  Fly   217 -KVCFG------------PKLGARAVSIAQLIELLMTCILYVVVCGDLLAGTYPQ---------- 258
             .|.:|            ...|.|.|....::..|..|.:|.|    .||..:.|          
Human   124 DTVMYGLESSPCSWLRNHAHWGRRVVDFFLIVTQLGFCCVYFV----FLADNFKQVIEAANGTTN 184

  Fly   259 -----------GSFDSRSWMLFVGIFLLPMGFLKSLKMVSTLSFWCTMSHIVINAVILGYCLLQI 312
                       .:.|||.:||....||:.:.|:::|:.:|..|....::.:|...:|..:.:.:|
Human   185 NCHNNETVILTPTMDSRLYMLSFLPFLVLLVFIRNLRALSIFSLLANITMLVSLVMIYQFIVQRI 249

  Fly   313 GDWGWSKVRFSIDMENFPISLGVIVFSYTSQIFLPTLEGNMIDRSKFNWMLDWSHIAAAVFKAGF 377
            .|  .|.:......:.:|:..|..:||:.....:..||..|.|..||..:|....:...:.....
Human   250 PD--PSHLPLVAPWKTYPLFFGTAIFSFEGIGMVLPLENKMKDPRKFPLILYLGMVIVTILYISL 312

  Fly   378 GYICFLTFQNDTQQVITNNLHSQGFKGMVNFFLVIKALLSYPLPYYAACELLERNFFRGPPKTKF 442
            |.:.:|.|..:.|..||.||.:......|.....|....:|.|.:|...|::...|....|:   
Human   313 GCLGYLQFGANIQGSITLNLPNCWLYQSVKLLYSIGIFFTYALQFYVPAEIIIPFFVSRAPE--- 374

  Fly   443 PTIWNLDGELKVWGLGFRVGVIVSTILMAIFIPHFSILMGFIGSFTGTMLSFIWPCYFHIKI--- 504
                  ..||.| .|..|..::..|.::||.||...:::..:||.:.:.|:.|.|....:..   
Human   375 ------HCELVV-DLFVRTVLVCLTCILAILIPRLDLVISLVGSVSSSALALIIPPLLEVTTFYS 432

  Fly   505 KGHLLDQKEIAKDYLIIGLGVLFGVIGIYDSGNALI 540
            :|  :....|.||.||..||.:..|:|.|::...||
Human   433 EG--MSPLTIFKDALISILGFVGFVVGTYEALYELI 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:382020 99/431 (23%)
SLC36A1XP_011535882.1 SLC5-6-like_sbd 53..459 CDD:294310 99/434 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165158533
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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