DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and SLC36A1

DIOPT Version :10

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:XP_047272876.1 Gene:SLC36A1 / 206358 HGNCID:18761 Length:507 Species:Homo sapiens


Alignment Length:546 Identity:123/546 - (22%)
Similarity:208/546 - (38%) Gaps:104/546 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 TAQQHHHSQQAQHKAMEA-GMDGGDT--TEMSSNPFRNAGSWTNDGEGGGDGDGEYRNEYQSTSF 104
            ||.....:...:.||..| |::.|..  ..||:...||                |..::|.||..
Human     2 TASTPEATPNMELKAPAAGGLNAGPVPPAAMSTQRLRN----------------EDYHDYSSTDV 50

  Fly   105 NEYDGRYQQTDGFRQGSIASEGS--SFVCEGEGGGGCKIDEFQAAWNVTNAIQGMFIVSLPFAVL 167
            :..:   ..::|.  .:::|.||  .|      |.......||...::.....|..::.||.||.
Human    51 SPEE---SPSEGL--NNLSSPGSYQRF------GQSNSTTWFQTLIHLLKGNIGTGLLGLPLAVK 104

  Fly   168 HGGYWAIV------AMVGIAHICCYTGKVLVQCLYEPDPATGQMVRVRDSYVAIA-KVCFG---- 221
            :.|   ||      .::||..:.|.  .:||:|.:.      ...|:..|:|... .|.:|    
Human   105 NAG---IVMGPISLLIIGIVAVHCM--GILVKCAHH------FCRRLNKSFVDYGDTVMYGLESS 158

  Fly   222 --------PKLGARAVSIAQLIELLMTCILYVVVCGDLLAGTYPQ-------------------- 258
                    ...|.|.|....::..|..|.:|.|    .||..:.|                    
Human   159 PCSWLRNHAHWGRRVVDFFLIVTQLGFCCVYFV----FLADNFKQVIEAANGTTNNCHNNETVIL 219

  Fly   259 -GSFDSRSWMLFVGIFLLPMGFLKSLKMVSTLSFWCTMSHIVINAVILGYCLLQIGDWGWSKVRF 322
             .:.|||.:||....||:.:.|:::|:.:|..|....::.:|...:|..:.:.:|.|  .|.:..
Human   220 TPTMDSRLYMLSFLPFLVLLVFIRNLRALSIFSLLANITMLVSLVMIYQFIVQRIPD--PSHLPL 282

  Fly   323 SIDMENFPISLGVIVFSYTSQIFLPTLEGNMIDRSKFNWMLDWSHIAAAVFKAGFGYICFLTFQN 387
            ....:.:|:..|..:||:.....:..||..|.|..||..:|....:...:.....|.:.:|.|..
Human   283 VAPWKTYPLFFGTAIFSFEGIGMVLPLENKMKDPRKFPLILYLGMVIVTILYISLGCLGYLQFGA 347

  Fly   388 DTQQVITNNLHSQGFKGMVNFFLVIKALLSYPLPYYAACELLERNFFRGPPKTKFPTIWNLDGEL 452
            :.|..||.||.:......|.....|....:|.|.:|...|::...|....|:         ..||
Human   348 NIQGSITLNLPNCWLYQSVKLLYSIGIFFTYALQFYVPAEIIIPFFVSRAPE---------HCEL 403

  Fly   453 KVWGLGFRVGVIVSTILMAIFIPHFSILMGFIGSFTGTMLSFIWPCYFHIKI---KGHLLDQKEI 514
            .| .|..|..::..|.::||.||...:::..:||.:.:.|:.|.|....:..   :|  :....|
Human   404 VV-DLFVRTVLVCLTCILAILIPRLDLVISLVGSVSSSALALIIPPLLEVTTFYSEG--MSPLTI 465

  Fly   515 AKDYLIIGLGVLFGVIGIYDSGNALI 540
            .||.||..||.:..|:|.|::...||
Human   466 FKDALISILGFVGFVVGTYEALYELI 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:444915 99/431 (23%)
SLC36A1XP_047272876.1 SLC5-6-like_sbd 78..484 CDD:444915 99/434 (23%)

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