Protein Alignment VGAT and slc-36.4

DIOPT Version :9

• Sequence 1: NP_610938.1
• Gene: VGAT / 36574
• FlyBaseID: FBgn0033911
• Length: 549
• Species: Drosophila melanogaster
• Sequence 2: NP_492453.1
• Gene: slc-36.4 / 186798
• WormBaseID: WBGene00010421
• Length: 481
• Species: Caenorhabditis elegans
• Alignment Length: 494
• Identity: 103/494 - (20%)
• Similarity: 199/494 - (40%)
• Gaps: 76/494 - (15%)

  Fly    88 GGDGDGEYRNEYQSTSFNEYDGRYQQTD---------GFRQGSIASEG-SSFVCEGEGGGGCKID 142
            |...:|:.|.:.:..|....:.|.:..|         ..:.|..|:.| .:|:| |..|.||
 Worm    21 GPTDNGQERKQQEFDSMGAKNDRDRPNDTKSVISTLIARKTGISATSGLINFIC-GMIGPGC--- 81

  Fly   143 EFQAAWNVTNAIQGMFIVSLPFAVLHGGYWAIVAMVGIAHICCYTGKVLVQCLYEPDPATGQM-- 205
             |..|            ||...|.|.||. |:|.:||.  :..|:...:|.|......:.|..
 Worm    82 -FSLA------------VSFKQAGLWGGL-ALVFIVGF--LSLYSMHKIVNCSQYLAKSNGDQSL 130

  Fly   206 -------VRVRDSYV------AIAKVCFGPKLGARAVSIAQLIELLMTCILYVVVCGDLLAGTYP 257
                   ..:::||.      .:||:.....|  .|..:..:...::..:.:|:...:..|.:.|
 Worm   131 DYGEMAEAAMQNSYKWARKHGKLAKIVINACL--LAFQLGVITVFMVFAVEHVIEIWEFFADSPP 193

  Fly   258 QGSFDSRSWMLFVGIFLLPMGFLKSLKMVSTLSFWCTMSHIVI-NAVILGYCLLQIGDW--GWSK 319
            ..|......|.||...||  .|:..:|:::.|   |...:::| .|::|....|.:..|  .| :
 Worm   194 PFSKCVMILMYFVPQMLL--NFIGHMKLLTIL---CLFGNVIIFAAIVLITKELMVHTWYPTW-E 252

  Fly   320 VRFSIDMENFPISLGVIVFSYTSQIFLPTLEGNM---IDRSKFNWMLDWSHIAAAVFKAGFGYIC 381
            :.....:|...::.|.:::|:..|..:..:|.::   .|.:....:|..:.....|..|..|:..
 Worm   253 LGSVTGIEGISLAAGALIYSFEGQAMVLPMENSLKYPKDMTGATGVLSTAMNLVTVLYAFLGFFG 317

  Fly   382 FLTFQNDTQQVITNNLHSQGFKGMVNFFLVIKALLSYPLPYYAACELLERNFFRGPPKTKFPTIW 446
            ::||....|..:|.||.:......:...||:|......:..|...::|..:.     ::|.....
 Worm   318 YVTFGPAVQGSLTLNLPNSILTVSIKGLLVLKIFFGSAIQLYVIVQMLLPSL-----RSKISEDR 377

  Fly   447 NLDGELKVWGLGFRVGVIVSTILMAIFIPHFSILMGFIGSFTGTMLSFIWPCYFH-------IKI 504
            .:...|..:.|  |:|:::.::.:|:.:|:...::..:|..:|.::|.|.|.:..       .|.
 Worm   378 KMVHRLLPYAL--RLGLMLISLCIALIVPNLMQIIPLVGITSGLLISLILPSFLDCMVFLPVFKK 440

  Fly   505 KGHLLD--QKEIAKDYLIIGLGVLFGVIGIYDSGNALIN 541
            :|.:..  ||.|...:|.: ||..|...|:|.|.:.:||
 Worm   441 QGDMFKFYQKLIINVFLFV-LGWFFLGAGLYSSIDDIIN 478

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
VGAT	NP_610938.1	SLC5-6-like_sbd	144..533	CDD:382020	84/418 (20%)
slc-36.4	NP_492453.1	Aa_trans	62..471	CDD:279788	93/444 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0814
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810