Protein Alignment VGAT and skat-1

DIOPT Version :9

• Sequence 1: NP_610938.1
• Gene: VGAT / 36574
• FlyBaseID: FBgn0033911
• Length: 549
• Species: Drosophila melanogaster
• Sequence 2: NP_498989.1
• Gene: skat-1 / 176271
• WormBaseID: WBGene00010307
• Length: 460
• Species: Caenorhabditis elegans
• Alignment Length: 490
• Identity: 112/490 - (22%)
• Similarity: 199/490 - (40%)
• Gaps: 84/490 - (17%)

  Fly    90 DGDGEYRNEYQSTSFNEYDGRYQQTDGFRQGSIASEGSSFVCEGEGGGGCKIDEFQAAWNVTNAI 154
            :||.|..|          |||.......|.|.:                  |...:|...::.::
 Worm    14 EGDAESMN----------DGRALVQPPARSGDV------------------ITPTRAVLTLSKSM 50

  Fly   155 QGMFIVSLPFAVLHGGYW-AIVAMVGIAHICCYTGKVLVQCLYEPDPATGQMVRVRD----SYVA 214
            ......|||:|...||.| :.|....||.:..|...:||:       |:..:.:..|    .|..
 Worm    51 FNAGCFSLPYAWKLGGLWVSFVMSFVIAGLNWYGNHILVR-------ASQHLAKKSDRSALDYGH 108

  Fly   215 IA-KVC---------FGPKLGARAVSIAQLIELLMTC---ILY-----VVVCGDLLAGTYPQGSF 261
            .| |||         ...|.....|::..|...|..|   ||:     |.:.||.|.||..|...
 Worm   109 FAKKVCDYSDIRFLRNNSKAVMYFVNVTILFYQLGMCSVAILFISDNLVNLVGDHLGGTRHQQMI 173

  Fly   262 DSRSWMLFVGIFLLPMGFLKSLKMVSTLSFWCTMSHIVINAVILGYCLLQIGDWGWSKVRFSIDM 326
            ...:..||   |:|.......:::||..:...::..::..|||:.|.:.|...  |.|:..:.:.
 Worm   174 LMATVSLF---FILLTNMFTEMRIVSFFALVSSVFFVIGAAVIMQYTVQQPNQ--WDKLPAATNF 233

  Fly   327 ENFPISLGVIVFSYTSQIFLPTLEGNMIDRSKF---NWMLDWSHIAAAVFKAGFGYICFLTFQND 388
            ......:|:.::::..|..:..:|..:.:.:.|   ..:|..:.|....|....|:..:..|.:.
 Worm   234 TGTITMIGMSMYAFEGQTMILPIENKLDNPAAFLAPFGVLSTTMIICTAFMTALGFFGYTGFGDS 298

  Fly   389 TQQVITNNLHSQGFKGMVNFFLVIKALLSYPLPYYAACELLERNFFRGPPKTKFPTI--WNLDGE 451
            ....||.|:..:|....||.||::::||...:..|...::. .|.||.....:||.:  |..|
 Worm   299 IAPTITTNVPKEGLYSTVNVFLMLQSLLGNSIAMYVVYDMF-FNGFRRKFGARFPNVPKWLSD-- 360

  Fly   452 LKVWGLGFRVGVIVSTILMAIFIPHFSILMGFIGSFTGTMLSFIWPCYFHI-----KIKGHLLDQ 511
                 .||||..::.|.|||:.||...|::..:|..:|.:.:.|:|.:|.:     ..||.|..:
 Worm   361 -----KGFRVFWVLVTYLMAVLIPKLEIMIPLVGVTSGALCALIFPPFFEMITFWTDWKGLLTYR 420

  Fly   512 KEIAKDYL---IIGLGVLFGVIGIYDSGNALINAF 543
            :.:.|.::   ::.:||...:.|:|.:.:|:|.:|
 Worm   421 QRMTKIFINLVVMAIGVFAIIAGVYTNIHAIIQSF 455

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
VGAT	NP_610938.1	SLC5-6-like_sbd	144..533	CDD:382020	98/424 (23%)
skat-1	NP_498989.1	Aa_trans	35..446	CDD:279788	99/448 (22%)
		SdaC	40..448	CDD:223884	99/427 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0814
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810