DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and Slc36a1

DIOPT Version :10

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_569099.1 Gene:Slc36a1 / 155205 RGDID:619801 Length:475 Species:Rattus norvegicus


Alignment Length:515 Identity:112/515 - (21%)
Similarity:190/515 - (36%) Gaps:110/515 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 MSSNPFRNAGSWTNDGEGGGDGDGEYRNEYQSTSFNEYDGRYQQTDGFRQGSI--ASEGSSFVCE 132
            ||:...||                |..::|.||..:..:...:....|..||.  ..|.||... 
  Rat     1 MSTQRLRN----------------EDYHDYSSTDVSPEESPSEGLGSFSPGSYQRLGENSSMTW- 48

  Fly   133 GEGGGGCKIDEFQAAWNVTNAIQGMFIVSLPFAVLHGGYW---AIVAMVGIAHICCYTGKVLVQC 194
                       ||...::.....|..::.||.||.:.|..   ..:.::||..:.|.  .:||:|
  Rat    49 -----------FQTLIHLLKGNIGTGLLGLPLAVKNAGLLLGPLSLLVIGIVAVHCM--GILVKC 100

  Fly   195 LY---------------------EPDPATGQMVRVRDSYVAIAKVCFGPKLGARAVSIAQLIELL 238
            .:                     |..|:|  .:|....:            |.|.|....::..|
  Rat   101 AHHLCRRLNKPFLDYGDTVMYGLECSPST--WIRNHSHW------------GRRIVDFFLVVTQL 151

  Fly   239 MTCILYVVVCGDLLAGTYPQ---------------------GSFDSRSWMLFVGIFLLPMGFLKS 282
            ..|.:|.|    .||..:.|                     .:.|||.:||....||:.:.|:::
  Rat   152 GFCCVYFV----FLADNFKQVIEAANGTTTNCNNNETVILTPTMDSRLYMLTFLPFLVLLSFIRN 212

  Fly   283 LKMVSTLSFWCTMSHIVINAVILGYCLLQIGDWGWSKVRFSIDMENFPISLGVIVFSYTS-QIFL 346
            |:::|..|....:|..|...:|..:.:.:|.|  .|.:......:.:|:..|..:|::.. .:.|
  Rat   213 LRILSIFSLLANISMFVSLIMIYQFIVQRIPD--PSHLPLVAPWKTYPLFFGTAIFAFEGIGVVL 275

  Fly   347 PTLEGNMIDRSKFNWMLDWSHIAAAVFKAGFGYICFLTFQNDTQQVITNNLHSQGFKGMVNFFLV 411
            | ||..|.|..||..:|........|.....|.:.:|.|..|.:..||.||.:......|.....
  Rat   276 P-LENKMKDSQKFPLILYLGMAIITVLYISLGSLGYLQFGADIKGSITLNLPNCWLYQSVKLLYS 339

  Fly   412 IKALLSYPLPYYAACELLERNFFRGPPKTKFPTIWNLDGELKVWGLGFRVGVIVSTILMAIFIPH 476
            |....:|.|.:|.|.|::........|: :|..:.:|..         |..::..|.::|:.||.
  Rat   340 IGIFFTYALQFYVAAEIIIPAIVSRVPE-RFELVVDLSA---------RTAMVCVTCVLAVLIPR 394

  Fly   477 FSILMGFIGSFTGTMLSFIWPCYFHI-KIKGHLLDQKEIAKDYLIIGLGVLFGVIGIYDS 535
            ..:::..:||.:.:.|:.|.|....: ...|..:....|.||.||..||.:..|:|.|:|
  Rat   395 LDLVISLVGSVSSSALALIIPPLLEVTTYYGEGISPLTITKDALISILGFVGFVVGTYES 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:444915 96/435 (22%)
Slc36a1NP_569099.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32 8/46 (17%)
SLC5-6-like_sbd 47..452 CDD:444915 96/449 (21%)

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