DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and SLC38A9

DIOPT Version :9

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_001336311.1 Gene:SLC38A9 / 153129 HGNCID:26907 Length:561 Species:Homo sapiens


Alignment Length:502 Identity:94/502 - (18%)
Similarity:188/502 - (37%) Gaps:127/502 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 GSSFVCEGEGGGGCKIDEFQAAWNVTNAIQGMFIVSLPFAVLHGGY---WAIVAMVGIAHI-CCY 186
            ||::..:....|..|.......:.:.|.:.|..|:|:|:.:...|:   ..::.::|:..: |||
Human   102 GSAYKLQSYTEGYGKNTSLVTIFMIWNTMMGTSILSIPWGIKQAGFTTGMCVIILMGLLTLYCCY 166

  Fly   187 TGKVLVQCLYEPDPATGQMVRVRDSYVAIAKVCFGPKLGARAVSIAQLIELLMTCILY------- 244
            ........::..|..:.:       |..:.:..|| ..|..:..:..|:.|:...|:|       
Human   167 RVVKSRTMMFSLDTTSWE-------YPDVCRHYFG-SFGQWSSLLFSLVSLIGAMIVYWVLMSNF 223

  Fly   245 ----------------------------VVVCGDLLAGTYPQGS-------------FD-----S 263
                                        .|:|....:|.:|..|             |:     |
Human   224 LFNTGKFIFNFIHHINDTDTILSTNNSNPVICPSAGSGGHPDNSSMIFYANDTGAQQFEKWWDKS 288

  Fly   264 RSWMLFVGIFLLPM------GFLKSLKMVSTLSFWCTMSHIVINAVILGYCLLQIGDWGW----- 317
            |:...::...|||:      .|.....::.|:|....:..:...||.||:.|    ::.|     
Human   289 RTVPFYLVGLLLPLLNFKSPSFFSKFNILGTVSVLYLIFLVTFKAVRLGFHL----EFHWFIPTE 349

  Fly   318 ---SKVRFSIDMENFPISLGVIVFSYTSQIFLPTLEGNMIDRSKFNWMLDWSHIAAAVFKAGFGY 379
               .::||     .||...||:..::.....:.||..|  ::.:.|.:.|.. ||..:....:.|
Human   350 FFVPEIRF-----QFPQLTGVLTLAFFIHNCIITLLKN--NKKQENNVRDLC-IAYMLVTLTYLY 406

  Fly   380 ICFLTFQNDTQQVITNNLHSQGFKGMVNF------------FLVIKALLSYP-LPYYAACELLER 431
            |..|.|.:.....::.:...|.|  :.||            ||:.:.:..|| |.|.|..:||..
Human   407 IGVLVFASFPSPPLSKDCIEQNF--LDNFPSSDTLSFIARIFLLFQMMTVYPLLGYLARVQLLGH 469

  Fly   432 NFFRGPPKTKFPTIWNLDGELKVWGLGFRVGVIVSTILMAIFIPHFSILMGFIGSFTGTMLSFIW 496
            .|     ...:|:|:::        |...:.::.:.::||.|.|:...::.:.|:..|....||:
Human   470 IF-----GDIYPSIFHV--------LILNLIIVGAGVIMACFYPNIGGIIRYSGAACGLAFVFIY 521

  Fly   497 PCYFHIKIKGHLLDQKEIAKDYLIIGLGVLFGVIGIYDSGNALINAF 543
            |...:| |..|  .::.:....||..:.::  ::|:   .|.::..|
Human   522 PSLIYI-ISLH--QEERLTWPKLIFHVFII--ILGV---ANLIVQFF 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:382020 88/472 (19%)
SLC38A9NP_001336311.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30
SLC5-6-like_sbd 115..556 CDD:320982 90/483 (19%)
Important for arginine binding and amino acid transport. /evidence=ECO:0000250|UniProtKB:Q08BA4 129..134 1/4 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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