DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and LOC1279313

DIOPT Version :10

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:XP_319019.4 Gene:LOC1279313 / 1279313 VectorBaseID:AGAMI1_009994 Length:494 Species:Anopheles gambiae


Alignment Length:527 Identity:106/527 - (20%)
Similarity:216/527 - (40%) Gaps:110/527 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 QQAQHKAMEAGMDGGDTTEMSSNPFRNAGSWTNDGEGGGDGDGE------YRNEYQSTSFNEYDG 109
            |..::..:...:.||..:|::...|....|..||..........      .:::.::.::|.::.
Mosquito    13 QHLEYTQIRPQLTGGSKSELTGYIFGRMKSELNDVPAQTAAGSTLPLVDMIKDDEEAGTYNPFEN 77

  Fly   110 R---YQQTDGFRQGSIASEGSSFVCEGEGGGGCKIDEFQAAWNVTNAIQGMFIVSLPFAVLHGGY 171
            |   :..||        .|....:.:|..|.|                    |:::|.|.::.|.
Mosquito    78 RKLTHPTTD--------METLVHLLKGSLGSG--------------------ILAMPLAFVNAGL 114

  Fly   172 W-AIVAMVGIAHICCYTGKVLVQCLY-----EPDPATGQMVRVRDSYVAIAKVCF--GP------ 222
            | .:||.|.|..||.|...:||:|.:     ...|:.|        :..:|:|.|  ||      
Mosquito   115 WFGLVATVAIGAICTYCIHILVRCSHILCRRAQLPSLG--------FADVAEVAFLAGPEQLKKY 171

  Fly   223 -KLGARAVSIAQLIELLMTCILYVV-VCGDL--LAGTYPQGSFDSRSWMLFVGIFLLPMGFLKSL 283
             :|....:::..:|:|:..|.:|:| |..:|  :...|....:|.|.::|.:...|:.:..::.|
Mosquito   172 SRLARFIINLFLVIDLVGCCCIYIVFVATNLKQVVDHYTHSYWDVRIYILMLLAPLILINLIRKL 236

  Fly   284 KMVSTLSFWCTMSHIVINA---VILGYCLLQIGDWGWSKVRFSIDMENFPISLGVIVFSYTSQIF 345
            |.::..||   :::::|.|   :.|.|.:..:.  ..|:.:...::::.|:..|.::|:......
Mosquito   237 KYLTPFSF---IANVLIGAGVGITLYYIVTDLP--ALSERKAMAEVQHLPMFFGTVIFALEGIGV 296

  Fly   346 LPTLEGNMIDRSKF---NWMLDWSHIAAAVFKAGFGYICFLTFQNDTQQVITNNLHSQGFKG-MV 406
            :.:||.||.:...|   ..:|:.......:..|..|::.:|.:.::|:..||.||..:.... ||
Mosquito   297 VMSLENNMKNPQNFIGCPGVLNTGMSVVVMLYATVGFLGYLKYGDETKGSITLNLPVEEVPAQMV 361

  Fly   407 NFFLVIKALLSYPLPYYAACELLERNFFRGPPKTKFPTIWNLDGELKVWGLGFRVGVIVSTILMA 471
            ...:.|...|:|.|.:|...|::.:| .:|          |.:..........|:|:::.|:::|
Mosquito   362 KLMIAIAIFLTYSLQFYVPMEIIWKN-IKG----------NFNEHQNAAEYTLRIGLVILTVIIA 415

  Fly   472 IFIPHFSILMGFIGSFTGTMLSFIWPCYFHIKIKGHLLDQKEIAKDYLIIGLG------------ 524
            ..:|:....:..||:...:.|..::|...            |:...|...|.|            
Mosquito   416 AALPNLGPFITLIGAVCLSTLGLMFPAVI------------ELVTFYEKPGFGRFNWILWKNVFL 468

  Fly   525 VLFGVIG 531
            :||||:|
Mosquito   469 ILFGVVG 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:444915 90/425 (21%)
LOC1279313XP_319019.4 SLC5-6-like_sbd 82..485 CDD:444915 96/458 (21%)

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