DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and SLC38A10

DIOPT Version :9

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:XP_011522590.1 Gene:SLC38A10 / 124565 HGNCID:28237 Length:1134 Species:Homo sapiens


Alignment Length:421 Identity:98/421 - (23%)
Similarity:175/421 - (41%) Gaps:83/421 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 NVTNAIQGMFIVSLPFAVLHGGYWAIVAMVGIAHICCYTGKVLVQCLYEPDPATGQMVRVRDSYV 213
            |:.|:|.|:.::::||.....|    :.:..:..:.| :......|::....|:   :..|.:|.
Human    14 NIVNSIVGVSVLTMPFCFKQCG----IVLGALLLVFC-SWMTHQSCMFLVKSAS---LSKRRTYA 70

  Fly   214 AIAKV-------CFGPKLGARAVSIAQLIELLMTCILYVVVCGDL-------LAGTYPQGSFDSR 264
            .:.:.       .:| |.|...|..:.:..:|.|||.:.||.|||       |.|....|:|  |
Human    71 GLGEAPSPQAFHAYG-KAGKMLVETSMIGLMLGTCIAFYVVIGDLGSNFFARLFGFQVGGTF--R 132

  Fly   265 SWMLF-VGI-FLLP-------MGFLKSLKMVSTLSFWCTMSHIVINAVILGYCLLQIGDW--GWS 318
            .::|| |.: .:||       |..::|...::.|.:...|..||::::..|   |..|.|  ..|
Human   133 MFLLFAVSLCIVLPLSLQRNMMASIQSFSAMALLFYTVFMFVIVLSSLKHG---LFSGQWLRRVS 194

  Fly   319 KVRFSIDMENFPISLGVIVFSYTSQIFLPTLEGNMIDRSKFNWMLDWSHIAAA------VFKAGF 377
            .||:.......|| .| :.|:..||: |||.:.  :|......|   |.|.|:      .|....
Human   195 YVRWEGVFRCIPI-FG-MSFACQSQV-LPTYDS--LDEPSVKTM---SSIFASSLNVVTTFYVMV 251

  Fly   378 GYICFLTFQNDTQQVITNNLHSQGFKGMVNFFLVIKALLSYP---LPYYAA-----CELLERN-- 432
            |:..:::|...|...:..:..|.....|:....::...:.:|   ||...|     ||..:::  
Human   252 GFFGYVSFTEATAGNVLMHFPSNLVTEMLRVGFMMSVAVGFPMMILPCRQALSTLLCEQQQKDGT 316

  Fly   433 FFRG--PPKTKFPTIWNLDGELKVWGLGFRVGVIVSTILMAIFIPHFSILMGFIGSFTGTMLSFI 495
            |..|  .|..:|..:              .:.|:..|::..|.||:...::|..|:..|:::.||
Human   317 FAAGGYMPPLRFKAL--------------TLSVVFGTMVGGILIPNVETILGLTGATMGSLICFI 367

  Fly   496 WPCYFHIKIKGHLLDQKEIAKDYLIIGLGVL 526
            .|...:.||..:.|..:.:    |.:|||||
Human   368 CPALIYKKIHKNALSSQVV----LWVGLGVL 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:382020 98/421 (23%)
SLC38A10XP_011522590.1 SLC5-6-like_sbd 6..388 CDD:294310 92/413 (22%)
SdaC 14..404 CDD:223884 98/421 (23%)
BASP1 488..690 CDD:283191
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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