DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and SLC36A4

DIOPT Version :9

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_689526.2 Gene:SLC36A4 / 120103 HGNCID:19660 Length:504 Species:Homo sapiens


Alignment Length:512 Identity:112/512 - (21%)
Similarity:189/512 - (36%) Gaps:131/512 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 NDGEGGGDGDGEYRNEYQSTSFNEYDGRYQQTDGFRQGSIASEGSSFVCEGEGGGGCKIDEFQAA 147
            |:....|..|.|:..|....     ...||..|        .||.|||              |..
Human    28 NEQNFDGTSDEEHEQELLPV-----QKHYQLDD--------QEGISFV--------------QTL 65

  Fly   148 WNVTNAIQGMFIVSLPFAVLHGGYWAIV------AMVGIAHICCYTGKVLVQCLYEPDPATGQMV 206
            .::.....|..::.||.|:.:.|   ||      ..:||..:.|.  .:||:|.:      ...:
Human    66 MHLLKGNIGTGLLGLPLAIKNAG---IVLGPISLVFIGIISVHCM--HILVRCSH------FLCL 119

  Fly   207 RVRDSYVAIA-KVCFGPKL------------GARAVSIAQLIELLMTCILYVVVCGDLLAGTY-- 256
            |.:.|.:..: .|.|..::            |...|....:|..|..|.:|:|...:.:...:  
Human   120 RFKKSTLGYSDTVSFAMEVSPWSCLQKQAAWGRSVVDFFLVITQLGFCSVYIVFLAENVKQVHEG 184

  Fly   257 ------------------PQGSFDSRSWMLFVGIFLLPMGFLKSLKMVSTLSFWCTMSHIVINAV 303
                              .:.|.|.|.:||....|::.:.|::.||.:..|||...:|..|...:
Human   185 FLESKVFISNSTNSSNPCERRSVDLRIYMLCFLPFIILLVFIRELKNLFVLSFLANVSMAVSLVI 249

  Fly   304 ILGYCLLQIGD-------WGWSKVRFSIDMENFPISLGVIVFSYTS-QIFLPTLEGNMIDRSKFN 360
            |..|.:..:.|       .||.|         :|:..|..||::.. .:.|| ||..|.:..:|.
Human   250 IYQYVVRNMPDPHNLPIVAGWKK---------YPLFFGTAVFAFEGIGVVLP-LENQMKESKRFP 304

  Fly   361 WMLD-WSHIAAAVF--KAGFGYICFLTFQNDTQQVITNNLHS-----QGFKGMVNFFLVIKALLS 417
            ..|: ...|...::  .|..||:|   |.::.:..||.||..     |..|.:.:|.:.:    :
Human   305 QALNIGMGIVTTLYVTLATLGYMC---FHDEIKGSITLNLPQDVWLYQSVKILYSFGIFV----T 362

  Fly   418 YPLPYYAACELLERNFFRGPPKTKFPTIWNLDGELKVWGLGFRVGVIVSTILMAIFIPHFSILMG 482
            |.:.:|...|::....     .:||.|.|.     ::...|.|..::..|...||.||...|::.
Human   363 YSIQFYVPAEIIIPGI-----TSKFHTKWK-----QICEFGIRSFLVSITCAGAILIPRLDIVIS 417

  Fly   483 FIGSFTGTMLSFIWPCYFHIKIKGHLLDQKE------IAKDYLIIGLGVLFGVIGIY 533
            |:|:.:.:.|:.|.|....|     |...||      :.|:..|...||:..::|.|
Human   418 FVGAVSSSTLALILPPLVEI-----LTFSKEHYNIWMVLKNISIAFTGVVGFLLGTY 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:382020 98/449 (22%)
SLC36A4NP_689526.2 SLC5-6-like_sbd 58..476 CDD:294310 103/469 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165158534
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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