DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and slc38a5a

DIOPT Version :10

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:XP_001344749.1 Gene:slc38a5a / 100005797 ZFINID:ZDB-GENE-081105-92 Length:491 Species:Danio rerio


Alignment Length:527 Identity:100/527 - (18%)
Similarity:182/527 - (34%) Gaps:172/527 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 FNEYDGRYQQTDGFR------QGSIASEGSSFVCEGEGGGGCKIDEFQAAWNVTNAIQGMFIVSL 162
            |..:|......:|.:      .|.|.::.:.|  ||:...|..|      :|::|||.|..|:.|
Zfish    22 FTGFDALENMAEGDQFLSSKSNGKIETQFTDF--EGKTSFGMSI------FNLSNAIMGSGILGL 78

  Fly   163 PFAVLHGGYWAIVAMV------------------GIAHICCY----------TGKVLVQCLYEPD 199
            .:|:.:.|....|.::                  |:..|..|          .|||:..|:    
Zfish    79 AYAMANTGIILFVFLLITIALLSSYSIHLLLRSAGVVGIRAYEQLGYRAFGTPGKVVAGCI---- 139

  Fly   200 PATGQMVRVRDSYVAIAKVCFGPKLGARAVSIAQLIELLMTCILYVVVCGDLLAGTYPQGS---- 260
             .|...:....||:.|.|           :.:..:||.|.               ..|..|    
Zfish   140 -ITLHNIGAMSSYLFIVK-----------IELPHVIEGLT---------------GLPDNSGHWY 177

  Fly   261 FDSRSWMLFVGI-FLLPMGFLKSLKMV---STLSFWCTMSHIVINAVILGYCLLQIGDWGWSKVR 321
            .|.|..::.|.: .:.|:..:|.|..:   |..|..|.:..::   .::..||...|        
Zfish   178 VDGRYLIIIVSVCVIFPLALMKRLGYLGYTSGFSLSCMVFFLI---SVIYKCLSNSG-------- 231

  Fly   322 FSIDMEN----------------------------------------FPISLGVIVFSYTSQIFL 346
              ||.|:                                        ...::.:|.|::.....:
Zfish   232 --IDSESNQNEKCTFSNASMISSTTEINEINSTTEICEAKLLTINPQTAFTIPIIAFAFVCHPEV 294

  Fly   347 PTLEGNMIDRSKFNWMLDWSHIA-AAVF-----KAGFGYICFLTFQNDTQQVITNNLHSQGFKGM 405
            ..:...:.:.|| ..|...::|: .|:|     .|.|||:.|  |.|...:::.....:......
Zfish   295 LPIYTELKNPSK-KQMQKVANISILAMFVMYLLTAIFGYLTF--FANVDSELLKMYNKNDILMLC 356

  Fly   406 VNFFLVIKALLSYPLPYY----AACELLERNFFRGPPKTKFPTIWNLDGELKVWGLGFRVGVIVS 466
            |...:::...|:.|:..:    |..:||      .|.|   |..|       |..:...:.::.:
Zfish   357 VRLAVLVAVTLTVPVVLFPIRRAVLQLL------FPEK---PFSW-------VRHIIIAMCLLFA 405

  Fly   467 TILMAIFIPHFSILMGFIGSFTGTMLSFIWPCYFHIKIKGHLLDQKEIAKD------YLIIGLGV 525
            ..|:.||:|:...:.||||:.:...|.||.|..|:|.|   :.:::|..|.      .|.:.||.
Zfish   406 VNLLVIFVPNIRDIFGFIGATSAPSLIFILPGIFYIYI---VPEEQEPLKSRPKILAILFVTLGF 467

  Fly   526 LFGVIGI 532
            :|.::.|
Zfish   468 IFMIMSI 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:444915 90/481 (19%)
slc38a5aXP_001344749.1 SLC5-6-like_sbd 55..479 CDD:444915 93/492 (19%)

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