Protein Alignment Sdb and H03A11.2

DIOPT Version :10

• Sequence 1: NP_610937.4
• Gene: Sdb / 36573
• FlyBaseID: FBgn0050069
• Length: 4012
• Species: Drosophila melanogaster
• Sequence 2: NP_510528.3
• Gene: H03A11.2 / 181617
• WormBaseID: WBGene00010357
• Length: 1218
• Species: Caenorhabditis elegans
• Alignment Length: 1179
• Identity: 278/1179 - (23%)
• Similarity: 463/1179 - (39%)
• Gaps: 280/1179 - (23%)

  Fly   610 THSERCICEICTCGRHHC-----SSSTTKSTENTVIQTEDNVDEAYTRIRTNTWSKEDNGNIPKQ 669
            :|..:|||:|||||||.|     :||.......|.:..|.::.:  |...::::.::.....|.:
 Worm     2 SHGAKCICQICTCGRHKCPHDRNASSFQLGDGKTGLSQEKSITQ--TSFESSSYHQKSQRTTPTR 64

  Fly   670 NEDILVDYIVIKK--PEDNLRPEGDFIVPPKEPYKPGEKREKIVHTDNLRTEGEMTFVEKEEYQ- 731
            :      |..|..  .|:|....|.   ......|..|.|.|   |.|    ||.:..|....|
 Worm    65 H------YSTISSLFTEENNTGTGG---TQTRNIKSSEYRAK---TQN----GEQSVAETRSTQR 113

  Fly   732 YTVRPGYVKPTDNLKPEGEFYSPEKPKYQPG-DRPSQVRHQDNLKPEGEFYTPEKPGYAPADRPT 795
            .||:...:...||    |...|      |.| :|.|:...|..|:...|    |:...|.:.|
 Worm   114 ETVQLPPILKADN----GRATS------QSGRERNSRSSIQQALRQHSE----ERANSAESKR-- 162

  Fly   796 QKRPVDNLKPEGEFVSPEKPKYTPAERP----EKIIRSDNLRTEGEMTFVEKEEYQYVTRPGQVK 856
                              :...|.|::.    |:|.............|..:..:|.    .::|
 Worm   163 ------------------QSTLTGAKKTVSINEQITGYQKTHRNSSQVFEARRLHQI----AELK 205

  Fly   857 PTDNLRPEGSFYSPEKAKYRP---GERPSQVRPVD-----NLKPEGDFYTPERPGFESAERPVQK 913
            ...|   .|:.....|.:.|.   |....|.:.::     |..|..:....|......|:|....
 Worm   206 DNSN---SGTSIDNAKVQTRAEKNGTNNQQHKLIEVNVNRNYSPRNNSQINELFKESGADRATSS 267

  Fly   914 KPEDNLKPDGEFVRP---EKQVYKPADK---TERIIR-KDNL--RTEGEMTFVEREEYHYVVRPD 969
            |...|..|......|   :||..|..|:   |.|.|. |.|:  .|:.:..|:.|:..|..:|
 Worm   268 KNTSNKTPQDNINSPKYSKKQAVKAHDRHSATHREIHGKQNMAHTTQNQEDFIYRKAEHTQIR-- 330

  Fly   970 QVKPLDN--------------LKPEGEFYSPEKPKYKPGERPSQVRPEDNLRPEG-----EFYTP 1015
              .|.|:              ...:.:..:.|...:..|||.::..|.||...:|     |..|.
 Worm   331 --HPSDHHILYSQQSRTSTNKTDQQSKTQNQEDYTHISGERYAKKVPSDNKILQGAGQQFEARTQ 393

  Fly  1016 EKPGFR--PAERPVQKKPQDN--LKPEGEFVKPEKQVYRPADKTERIIRKDNLRTEGEMTFVERE 1076
            .:..|.  ..||..||.|.||  |:.:|:..:.:.|                  .:.:.|.:..|
 Worm   394 NQEDFTHISGERYAQKVPSDNKILQGDGQHFEAKTQ------------------NQEDFTHISGE 440

  Fly  1077 EYQYVVRPDQVKPLDN--LKPEGEFY-----SPEKPKYKPGERPSQVRPEDN--LRPEGEFY--- 1129
            .|...|      |.||  |:.:|:.:     :.|...:..|||.::..|.||  |:.:|:.:
 Worm   441 RYAKKV------PSDNKILQGDGQQFEARTQNQEDFTHISGERYAKKVPSDNKILQGDGQQFEAR 499

  Fly  1130 TPEKPGFR--PAERPEQKKPEDN--LKPEGEFY-----SPEKPKYKPGERPSQVRPEDN--LRPE 1183
            |..:..|.  ..||..:|.|.||  |:.:|:.:     :.|...:..|||.::..|.||  |:.:
 Worm   500 TQNQEDFTHISGERYAKKVPSDNKILQGDGQQFEARTQNQEDFTHISGERYAKKVPSDNKILQGD 564

  Fly  1184 GEFY---TPEKPGFR--PAERPEQKKPEDN--LKPEGEFY-----SPEKPKYKPGERPSQVRPED 1236
            |:.:   |..:..|.  ..||..:|.|.||  |:.:|:.:     :.|...:..|||.::..|.|
 Worm   565 GQHFEAKTQNQEDFTHISGERYAKKVPSDNKILQGDGQHFEARTQNQEDFTHISGERYAKKVPSD 629

  Fly  1237 N--LRPEGEFY---TPEKPGFR--PAERPVQKKPQDN--LKPEGEFVKPEKQVYRPADKTERIIR 1292
            |  |:.:|:.:   |..:..|.  ..||..:|.|.||  |:.:|:..:...|
 Worm   630 NKILQGDGQHFEARTQNQEDFTHISGERYAKKVPSDNKILQGDGQQFEARTQ------------- 681

  Fly  1293 KDNLRTEGEMTFVEREEYQYVVRPDQVKPLDN--LKPEGEFY-----SPEKPKYKPGERPSQVRP 1350
                 .:.:.|.:..|.|...|      |.||  |:.:|:.:     :.|...:..|||.::..|
 Worm   682 -----NQEDFTHISGERYAKKV------PSDNKILQGDGQQFEARTQNQEDFTHISGERYAKKVP 735

  Fly  1351 EDN--LRPEGEFY---TPEKPGFR--PAERPEQKKPEDN--LKPEGEFY-----SPEKPKYKPGE 1401
            .||  |:.:|:.:   |..:..|.  ..||..:|.|.||  |:.:|:.:     :.|...:..||
 Worm   736 SDNKILQGDGQHFEARTQNQEDFTHISGERYAKKVPSDNKILQGDGQQFEARTQNQEDFTHISGE 800

  Fly  1402 RPSQVRPEDN--LRPEGEFY---TPEKPGFR--PAERPEQKKPQDN--LKPEGEFY-----SPEK 1452
            |.::..|.||  |:.:|:.:   |..:..|.  ..||..:|.|.||  |:.:|:.:     :.|.
 Worm   801 RYAKKVPSDNKILQGDGQQFEARTQNQEDFTHISGERYAKKVPSDNKILQGDGQQFEARTQNQED 865

  Fly  1453 PKYKPGERPSQVRPEDN--LRPEGEFY---TPEKPGFR--PAERPEQKKPEDN--LKPEGEFY-- 1506
            ..:..|||.::..|.||  |:.:|:.:   |..:..|.  ..||..:|.|.||  |:.:|:.:
 Worm   866 FTHISGERYAKKVPSDNKILQGDGQQFEARTQNQEDFTHISGERYAKKVPSDNKILQGDGQQFEA 930

  Fly  1507 ---SPEKPKYKPGERPSQVRPEDN--LRPEGEFY---TPEKPGFR--PAERPEQKKPQDN--LKP 1559
               :.|...:..|||.::..|.||  |:.:|:.:   |..:..|.  ..||..:|.|.||  |:.
 Worm   931 RTQNQEDFTHISGERYAKKVPSDNKILQGDGQQFEARTQNQEDFTHISGERYAKKVPSDNKILQG 995

  Fly  1560 EGEFY-----SPEKPKYKPGERPSQVRPEDN--LRPEGEFY---TPEKPGF--RPAERPEQKKPQ 1612
            :|:.:     :.|...:..|||.::..|.||  |:.:|:.:   |..:..|  |..||..:..|.
 Worm   996 DGQHFEAKTQNQEDFTHISGERYAKKVPSDNKILQGDGQHFEAKTQNQEDFIHRRNERVIRSVPI 1060

  Fly  1613 DN--LKPEG 1619
            .:  |..||
 Worm  1061 QHKILSSEG 1069

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sdb	NP_610937.4	PTZ00449	<747..1157	CDD:185628	99/470 (21%)
		PspC_subgroup_2	<1008..1337	CDD:468202	91/388 (23%)
		PspC_subgroup_2	<1240..1576	CDD:468202	99/405 (24%)
		PspC_subgroup_2	<1414..1750	CDD:468202	67/255 (26%)
		PspC_subgroup_2	<1646..1982	CDD:468202
		PspC_subgroup_2	<1900..2149	CDD:468202
		PTZ00121	<2267..2975	CDD:173412
		PspC_subgroup_2	<2690..3026	CDD:468202
		auto_AIDA-I	3622..>3968	CDD:380183
H03A11.2	NP_510528.3	STOP	6..>31	CDD:310081	13/24 (54%)