DRSC/TRiP Functional Genomics Resources

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Protein Alignment cg and TT1

DIOPT Version :9

Sequence 1:NP_001097306.2 Gene:cg / 36571 FlyBaseID:FBgn0000289 Length:837 Species:Drosophila melanogaster
Sequence 2:NP_174737.2 Gene:TT1 / 840386 AraportID:AT1G34790 Length:303 Species:Arabidopsis thaliana


Alignment Length:170 Identity:40/170 - (23%)
Similarity:59/170 - (34%) Gaps:58/170 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   348 YQCQECKKSFTLKHHLLTHSRVHS---RERP----------------FVCQE-C------GRAFP 386
            :.|..|.|:|...::|..|...|.   |:.|                :.|.| |      .|:.|
plant   145 FSCHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLKGTQPRAMLGIPCYCCVEGCRNHIDHPRSKP 209

  Fly   387 LK--RHLVTHSKFHAGERPYVCEECGESFAQENHLIMHSRFHGSLNPFVCAECGASFPRKFQLVN 449
            ||  |.|.||.|...|.:|:.|..||:..|.:.....|.:           .||..:        
plant   210 LKDFRTLQTHYKRKHGHKPFSCRLCGKLLAVKGDWRTHEK-----------NCGKRW-------- 255

  Fly   450 HGRIHGKIPHSCTVCGKEFLQKRTLVSHMRRVHTGEQAHP 489
                       ..|||.:|..||:|..|::...:|...:|
plant   256 -----------VCVCGSDFKHKRSLKDHVKAFGSGHGPYP 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cgNP_001097306.2 COG5048 287..>371 CDD:227381 6/22 (27%)
C2H2 Zn finger 294..314 CDD:275368
zf-H2C2_2 306..331 CDD:290200
C2H2 Zn finger 322..342 CDD:275368
C2H2 Zn finger 350..370 CDD:275368 6/19 (32%)
zf-H2C2_2 362..385 CDD:290200 9/48 (19%)
C2H2 Zn finger 378..398 CDD:275368 12/28 (43%)
zf-H2C2_2 390..415 CDD:290200 9/24 (38%)
C2H2 Zn finger 406..426 CDD:275368 5/19 (26%)
SIR2 <425..>465 CDD:294129 3/39 (8%)
C2H2 Zn finger 434..454 CDD:275368 2/19 (11%)
C2H2 Zn finger 461..482 CDD:275368 8/20 (40%)
C2H2 Zn finger 490..509 CDD:275368 40/170 (24%)
lambda-1 491..>603 CDD:212564
C2H2 Zn finger 575..595 CDD:275368
C2H2 Zn finger 720..740 CDD:275368
C2H2 Zn finger 752..771 CDD:275368
TT1NP_174737.2 C2H2 Zn finger 231..247 CDD:275368 4/15 (27%)
C2H2 Zn finger 257..274 CDD:275368 8/16 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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