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Protein Alignment cg and IDD1

DIOPT Version :9

Sequence 1:	NP_001097306.2	Gene:	cg / 36571	FlyBaseID:	FBgn0000289	Length:	837	Species:	Drosophila melanogaster
Sequence 2:	NP_201474.1	Gene:	IDD1 / 836806	AraportID:	AT5G66730	Length:	500	Species:	Arabidopsis thaliana

Alignment Length:	369	Identity:	81/369 - (21%)
Similarity:	134/369 - (36%)	Gaps:	93/369 - (25%)

- Green bases have known domain annotations that are detailed below.

  Fly   341 LHSTERPYQCQECKKSFTLKHHLLTHSRVHS-------------RERPFVCQECG-------RAF 385
            |.:|.| :.|:.|.|.|....:|..|.|.|:             |::.:||...|       ||.
plant    55 LMATNR-FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTKEVRKKVYVCPVSGCVHHDPSRAL 118

  Fly   386 ----PLKRHLVTHSKFHAGERPYVCEECGESFAQENHLIMHSRFHGSLNPFVCAECGASFPRKFQ 446
                .:|:|.   .:.| ||:.:.||:|.:.:|.::....||:..|: ..:.| :||..|.|:..
plant   119 GDLTGIKKHF---CRKH-GEKKWKCEKCSKKYAVQSDWKAHSKICGT-KEYKC-DCGTLFSRRDS 177

  Fly   447 LVNHGRIHGKIPHSCTVCGKEFLQKRTLVSHM------RRVHTGEQAHPCVSCGEGFLTKAELHQ 505
            .:.|...       |....:|..:..|....:      |:....||..|........|..:....
plant   178 FITHRAF-------CDALAEESAKNHTQSKKLYPETVTRKNPEIEQKSPAAVESSPSLPPSSPPS 235

  Fly   506 HVRTAHNGVNPNTSSATIIANQQL--QQAHHHQAGQQTHPQTI------TVVSNPGNSTLLTVST 562
            ........::..|.|..||::..|  |.:...|. ...||:.|      |:..|..:|.|....:
plant   236 VAIAPAPAISVETESVKIISSSVLPIQNSPESQE-NNNHPEVIIEEASRTIGFNVSSSDLSNDHS 299

  Fly   563 TDANGVARPQFVCRECGSAFNSREALALHLRLHTGDKSLMTDLCALTAALPGHFLSTASLNP-GT 626
            .:..|.|         |...:|..:.:|:               |.:.|.|..|..::|:.| ..
plant   300 NNNGGYA---------GLFVSSTASPSLY---------------ASSTASPSLFAPSSSMEPISL 340

  Fly   627 VVTANPNLVGQ---------SPVPVQIISSTGQVMSQTTLVQAA 661
            .::.||:|.|.         :|:|.|      ..||.|.|:|.|
plant   341 CLSTNPSLFGPTIRDPPHFLTPLPPQ------PAMSATALLQKA 378

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.