DRSC/TRiP Functional Genomics Resources

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Protein Alignment cg and ZNF143

DIOPT Version :9

Sequence 1:NP_001097306.2 Gene:cg / 36571 FlyBaseID:FBgn0000289 Length:837 Species:Drosophila melanogaster
Sequence 2:XP_005253178.1 Gene:ZNF143 / 7702 HGNCID:12928 Length:653 Species:Homo sapiens


Alignment Length:740 Identity:189/740 - (25%)
Similarity:277/740 - (37%) Gaps:194/740 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 VQKDVKGLTAGGKNNVVRRMFVVNDPSFPPG---TQRVITAGGASTVVKKQDN--NQQVLSLDKN 114
            :.:|.:|:|                 .||.|   .|.|......:..|...||  |.:.:||.  
Human    21 INRDSQGMT-----------------EFPGGGMEAQHVTLCLTEAVTVADGDNLENMEGVSLQ-- 66

  Fly   115 YLLVDPATAAAAAAAAGGDSGLAHHHTLTNGSIVDAKTGQTV-LTAGSAAAKSHF----SSIGAL 174
                       |...|.|.:....|:: .:..::|   ||.: |..||||...|.    |:..:|
Human    67 -----------AVTLADGSTAYIQHNS-KDAKLID---GQVIQLEDGSAAYVQHVPIPKSTGDSL 116

  Fly   175 HLTQEECNEILIKRAIAAGHHQT----------HTITAADGSH---HHA-------------SGG 213
            .|  |:...:.::....|..|.|          ..:...||:.   |||             :.|
Human   117 RL--EDGQAVQLEDGTTAFIHHTSKDSYDQSALQAVQLEDGTTAYIHHAVQVPQSDTILAIQADG 179

  Fly   214 TPSFCSVGGATTLLGDILPGISVQVQKV-IQGLED-------NEDSQGEAPNLKLEPGTLELSPK 270
            |.:....|.| |:..|.:..:.....|| |.|.|.       .|:.|.:...:.|:.....::.|
Human   180 TVAGLHTGDA-TIDPDTISALEQYAAKVSIDGSESVAGTGMIGENEQEKKMQIVLQGHATRVTAK 243

  Fly   271 TELQESMHFSETDATIKKERPYSC--DECGKSFLLKHHLTTHARVHTGERPHICTH--CGKSFAH 331
            :  |:|           .|:.:.|  |.|||.:...|||..|.|.|||:||:.|.|  |||:||.
Human   244 S--QQS-----------GEKAFRCEYDGCGKLYTTAHHLKVHERSHTGDRPYQCEHAGCGKAFAT 295

  Fly   332 KHCLNTHLLLHSTERPYQCQE--CKKSFTLKHHLLTHSRVHSRERPFVC--QECGRAFPLKRHLV 392
            .:.|.:|:..|:.|:||:|.|  |.|||.....|..|.|.|:.||||.|  :.|||:|.......
Human   296 GYGLKSHVRTHTGEKPYRCSEDNCTKSFKTSGDLQKHIRTHTGERPFKCPFEGCGRSFTTSNIRK 360

  Fly   393 THSKFHAGERPYVCEECGESFAQENHLIMHSRFHGSLNPFVCAECGASFPRKFQLVNHGRIH-GK 456
            .|.:.|.|||||.|.|.|                          ||.:|.......||.||| |:
Human   361 VHVRTHTGERPYYCTEPG--------------------------CGRAFASATNYKNHVRIHTGE 399

  Fly   457 IPHSCTV--CGKEFLQKRTLVSHMRRVHTGEQAHPCVSCGEGFLTKAELHQHVRTAHNGVNPNTS 519
            .|:.|||  |.|.|.:..:|..| ..|||..:.:.|..||:.:...:.|..|.|||||...|...
Human   400 KPYVCTVPGCDKRFTEYSSLYKH-HVVHTHSKPYNCNHCGKTYKQISTLAMHKRTAHNDTEPIEE 463

  Fly   520 SATIIANQQLQQAHHHQAGQQTHPQTITVVSN-PGNSTLLT-VSTTDANGVARPQFVCRECGSAF 582
            ...........|......|.|     ||.|:. .|:..:.| |:|...:|:::...:..:.|:. 
Human   464 EQEAFFEPPPGQGEDVLKGSQ-----ITYVTGVEGDDVVSTQVATVTQSGLSQQVTLISQDGTQ- 522

  Fly   583 NSREALALHLRLHTGDKSLMTDLCALTAALPGHFLSTASLNPGTVVTANPNLVGQSPVPVQIISS 647
                    |:.:...|...:.:...:..            ..||.:|.        |....:|||
Human   523 --------HVNISQADMQAIGNTITMVT------------QDGTPITV--------PAHDAVISS 559

  Fly   648 TGQVMSQTTLVQAANSTHPQAVVTAVPTMPVHGQQQHLQHVAQ-----QQQQQQQQQQQQQQHVV 707
            .|              ||..|:|||..|   .|:|..:  |||     .....:...||...|:|
Human   560 AG--------------THSVAMVTAEGT---EGEQVAI--VAQDLAAFHTASSEMGHQQHSHHLV 605

  Fly   708 SVAPANKPKSHFCASCGKGFAAKHG 732
            :.  ..:|.:....|.|...|.:.|
Human   606 TT--ETRPLTLVATSNGTQIAVQLG 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cgNP_001097306.2 COG5048 287..>371 CDD:227381 38/89 (43%)
C2H2 Zn finger 294..314 CDD:275368 10/21 (48%)
zf-H2C2_2 306..331 CDD:290200 15/26 (58%)
C2H2 Zn finger 322..342 CDD:275368 9/21 (43%)
C2H2 Zn finger 350..370 CDD:275368 9/21 (43%)
zf-H2C2_2 362..385 CDD:290200 12/24 (50%)
C2H2 Zn finger 378..398 CDD:275368 6/21 (29%)
zf-H2C2_2 390..415 CDD:290200 10/24 (42%)
C2H2 Zn finger 406..426 CDD:275368 3/19 (16%)
SIR2 <425..>465 CDD:294129 13/42 (31%)
C2H2 Zn finger 434..454 CDD:275368 6/19 (32%)
C2H2 Zn finger 461..482 CDD:275368 8/22 (36%)
C2H2 Zn finger 490..509 CDD:275368 5/18 (28%)
lambda-1 491..>603 CDD:212564 24/113 (21%)
C2H2 Zn finger 575..595 CDD:275368 2/19 (11%)
C2H2 Zn finger 720..740 CDD:275368 4/13 (31%)
C2H2 Zn finger 752..771 CDD:275368
ZNF143XP_005253178.1 Trp-synth-beta_II <97..207 CDD:294246 24/112 (21%)
C2H2 Zn finger 254..276 CDD:275368 10/21 (48%)
zf-H2C2_2 268..295 CDD:290200 15/26 (58%)
COG5048 279..>337 CDD:227381 24/57 (42%)
C2H2 Zn finger 284..306 CDD:275368 9/21 (43%)
zf-H2C2_2 299..325 CDD:290200 12/25 (48%)
zf-C2H2_8 314..429 CDD:292531 50/141 (35%)
C2H2 Zn finger 314..336 CDD:275368 9/21 (43%)
zf-H2C2_2 328..355 CDD:290200 13/26 (50%)
C2H2 Zn finger 344..366 CDD:275368 6/21 (29%)
zf-H2C2_2 360..385 CDD:290200 13/50 (26%)
C2H2 Zn finger 374..396 CDD:275368 9/47 (19%)
zf-H2C2_2 388..414 CDD:290200 12/25 (48%)
C2H2 Zn finger 404..426 CDD:275368 8/22 (36%)
C2H2 Zn finger 434..453 CDD:275368 5/18 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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