DRSC/TRiP Functional Genomics Resources

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Protein Alignment cg and ZNF90

DIOPT Version :10

Sequence 1:NP_001097306.2 Gene:cg / 36571 FlyBaseID:FBgn0000289 Length:837 Species:Drosophila melanogaster
Sequence 2:NP_009069.1 Gene:ZNF90 / 7643 HGNCID:13165 Length:601 Species:Homo sapiens


Alignment Length:513 Identity:139/513 - (27%)
Similarity:208/513 - (40%) Gaps:101/513 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   272 ELQESMHFSETDATIKK----ERPYSCDECGKSFLLKHHLTTHARVHTGERPHICTHCGKSFAHK 332
            |..::.:.|.|.||.||    |....|:||||:|....|||:|.|:||||:.:.|..|||...:.
Human   177 ECGKAFNQSSTLATHKKIHTGEITCKCEECGKAFNRSSHLTSHKRIHTGEKRYKCEDCGKELKYS 241

  Fly   333 HCLNTHLLLHSTERPYQCQECKKSFTLKHHLLTHSRVHSRERPFVCQECGRAFPLKRHLVTHSKF 397
            ..|..|..:|:.|:.|:|::|.|.......|..|.|:|:.|:|:.|.:|||||.....|..|...
Human   242 STLTAHKRIHTGEKRYKCEDCGKELKYSSTLTAHKRIHTGEKPYKCDKCGRAFISSSILYVHKIS 306

  Fly   398 HAGERPYVCEECGESFAQENHLIMHSRFHGSLNPFVCAECGASFPRKFQLVNHGRIH-GKIPHSC 461
            |..|:||.|||||::|...:.|..|.|.|....|:.|.|||.:|.|...|..|.||| |:.|:.|
Human   307 HTEEKPYKCEECGKAFKLSSILSTHKRIHTGEKPYKCEECGKAFRRSLVLRTHKRIHTGEKPYKC 371

  Fly   462 TVCGKEFLQKRTLVSHMRRVHTGEQAHPCVSCGEGFLTKAELHQHVRTAHNGVNPNTSSATIIAN 526
            ..|||.|:....|..| :..|:.::.:.|..||:.|...:.|..| :.:|....|...       
Human   372 DKCGKAFISSSLLYKH-KISHSEKKPYKCEECGKAFKRSSTLTIH-KISHTEEKPYKC------- 427

  Fly   527 QQLQQAHHHQAGQQTHPQTITVVSNPGNSTLLTVSTTDANGVARPQFVCRECGSAFNSREALALH 591
            |:..:.....:...||.     :.:.|.               :| :.|.|||.||.....|..|
Human   428 QECDKVFKRSSALSTHK-----IIHSGE---------------KP-YKCEECGKAFKRSSNLTTH 471

  Fly   592 LRLHTGDKSLMTDLCALTAALPGHFLSTASLNPGTVVTANPNLVGQSPVPVQIISSTGQVMSQTT 656
            ...||.:|......|...      |..:::|:...::.:     |::|...:   ..|:...:::
Human   472 KISHTEEKLYKCQECDKA------FKYSSALSTHKIIHS-----GENPYKCE---ECGKAFKRSS 522

  Fly   657 LVQAANSTHPQAVVTAVPTMPVHGQQQHLQHVAQQQQQQQQQQQQQQQHVVSVAPANKPKSHFCA 721
            ::......|..|                                               |.:.|.
Human   523 VLSKHKIIHTGA-----------------------------------------------KPYKCE 540

  Fly   722 SCGKGFAAKHGLMQHNRRHPNGGCTVRTHVC-ECGKAFFQKNHLMLHQRQHLETKPAI 778
            .|||.|.....|..|...|..    .:.:.| ||||||...:.|..|:|.|:..|..|
Human   541 ECGKAFKRSSQLTSHKISHTG----EKPYKCEECGKAFNLSSDLNTHKRIHIGQKAYI 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cgNP_001097306.2 COG5048 287..>371 CDD:227381 33/87 (38%)
C2H2 Zn finger 294..314 CDD:275368 11/19 (58%)
zf-H2C2_2 306..331 CDD:463886 13/24 (54%)
C2H2 Zn finger 322..342 CDD:275368 6/19 (32%)
C2H2 Zn finger 350..370 CDD:275368 6/19 (32%)
C2H2 Zn finger 378..398 CDD:275368 8/19 (42%)
C2H2 Zn finger 406..426 CDD:275368 9/19 (47%)
C2H2 Zn finger 434..454 CDD:275368 9/19 (47%)
C2H2 Zn finger 461..482 CDD:275368 7/20 (35%)
C2H2 Zn finger 490..509 CDD:275368 6/18 (33%)
C2H2 Zn finger 575..595 CDD:275368 8/19 (42%)
C2H2 Zn finger 720..740 CDD:275368 7/19 (37%)
C2H2 Zn finger 752..771 CDD:275368 10/19 (53%)
ZNF90NP_009069.1 KRAB 4..62 CDD:214630
C2H2 Zn finger 175..195 CDD:275368 7/17 (41%)
COG5048 202..588 CDD:227381 128/480 (27%)
C2H2 Zn finger 203..223 CDD:275368 11/19 (58%)
C2H2 Zn finger 231..251 CDD:275368 6/19 (32%)
C2H2 Zn finger 259..279 CDD:275368 6/19 (32%)
C2H2 Zn finger 287..307 CDD:275368 8/19 (42%)
C2H2 Zn finger 315..335 CDD:275368 9/19 (47%)
C2H2 Zn finger 343..363 CDD:275368 9/19 (47%)
C2H2 Zn finger 371..391 CDD:275368 7/20 (35%)
C2H2 Zn finger 399..419 CDD:275368 6/20 (30%)
C2H2 Zn finger 427..447 CDD:275368 3/31 (10%)
C2H2 Zn finger 455..475 CDD:275368 8/19 (42%)
C2H2 Zn finger 483..503 CDD:275368 3/25 (12%)
C2H2 Zn finger 511..531 CDD:275368 1/22 (5%)
C2H2 Zn finger 539..559 CDD:275368 7/19 (37%)
C2H2 Zn finger 567..587 CDD:275368 10/19 (53%)
Blue background indicates that the domain is not in the aligned region.

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