DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cg and Plag1

DIOPT Version :9

Sequence 1:NP_001097306.2 Gene:cg / 36571 FlyBaseID:FBgn0000289 Length:837 Species:Drosophila melanogaster
Sequence 2:NP_064353.2 Gene:Plag1 / 56711 MGIID:1891916 Length:499 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cgNP_001097306.2 COG5048 287..>371 CDD:227381
C2H2 Zn finger 294..314 CDD:275368
zf-H2C2_2 306..331 CDD:290200
C2H2 Zn finger 322..342 CDD:275368
C2H2 Zn finger 350..370 CDD:275368
zf-H2C2_2 362..385 CDD:290200
C2H2 Zn finger 378..398 CDD:275368
zf-H2C2_2 390..415 CDD:290200
C2H2 Zn finger 406..426 CDD:275368
SIR2 <425..>465 CDD:294129
C2H2 Zn finger 434..454 CDD:275368
C2H2 Zn finger 461..482 CDD:275368
C2H2 Zn finger 490..509 CDD:275368
lambda-1 491..>603 CDD:212564
C2H2 Zn finger 575..595 CDD:275368
C2H2 Zn finger 720..740 CDD:275368
C2H2 Zn finger 752..771 CDD:275368
Plag1NP_064353.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33
Interaction with KPNA2. /evidence=ECO:0000250 2..84
Nuclear localization signal. /evidence=ECO:0000250 22..25
C2H2 Zn finger 36..56 CDD:275368
Decreased nuclear import with localization in the nucleus but also in the cytoplasm. /evidence=ECO:0000250 41..242
SFP1 <58..139 CDD:227516
C2H2 Zn finger 64..86 CDD:275368
zf-H2C2_2 79..103 CDD:404364
C2H2 Zn finger 94..114 CDD:275368
C2H2 Zn finger 123..143 CDD:275368
C2H2 Zn finger 152..172 CDD:275368
C2H2 Zn finger 187..207 CDD:275368
C2H2 Zn finger 215..233 CDD:275368
Activates transcription, Inhibition of nuclear import due to lack of NLS and KPNA2 interaction. /evidence=ECO:0000250 243..499
Repression domain, contains 3 sumoylation motifs and massively decrease transcription activity. /evidence=ECO:0000250 243..383
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 365..400
Massively activates transcription. /evidence=ECO:0000250 384..499
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.