DRSC/TRiP Functional Genomics Resources

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Protein Alignment cg and si:ch211-119o8.6

DIOPT Version :10

Sequence 1:NP_001097306.2 Gene:cg / 36571 FlyBaseID:FBgn0000289 Length:837 Species:Drosophila melanogaster
Sequence 2:NP_001108212.1 Gene:si:ch211-119o8.6 / 556659 ZFINID:ZDB-GENE-070912-17 Length:735 Species:Danio rerio


Alignment Length:584 Identity:149/584 - (25%)
Similarity:228/584 - (39%) Gaps:106/584 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 LEDNEDSQGEAP-------------NLKLEPG-TLELSPKTELQESMHFSETDATIKKERPYSCD 295
            |.:..|| ||.|             ||.|:.| :.|........|.:|        ..::|:.|.
Zfish   179 LTEPNDS-GEPPHLSTTTTCRSLRSNLCLKCGKSFERKSDLRAHEKVH--------SLQKPHQCS 234

  Fly   296 ECGKSFLLKHHLTTHARV----------------------------HTGERPHICTHCGKSFAHK 332
            .||||::.:|.|:.|.|:                            ||||:|..|:.|||||:.:
Zfish   235 TCGKSYVDRHELSMHERLHTGEKLFDCSYCKKKFVRESALKYHLRSHTGEKPFSCSQCGKSFSRR 299

  Fly   333 HCLNTHLLLHSTERPYQCQECKKSFTLKHHLLTHSRVHSRERPFVCQECGRAFPLKRHLVTHSKF 397
            ..|||||.||....|:||..|.|.|.....:..|...|:.||||.|.:|.:.|..|..|..|...
Zfish   300 STLNTHLRLHMGPLPHQCDHCGKLFNTAAAMRAHRATHTGERPFPCPQCDKKFIFKAELEVHLDG 364

  Fly   398 HAGERPYVCEECGESFAQENHLIMHSRFHGSLNPFVCAECGASFPRKFQLVNHGRIH-GKIPHSC 461
            |||.:|:.|..||:.|.::....:|...|.....|.|..|..||.|...|.:|.:|| .:.||.|
Zfish   365 HAGNKPFKCSVCGKGFLRKQECNVHQTIHQDKRSFHCTYCDNSFKRLSHLTSHLKIHYPESPHKC 429

  Fly   462 TVCGKEFLQKRTLVSHMRRVHTGEQAHPCVSCGEGFLTKAELHQHVRTAHNGVNPNTSSATI-IA 525
            |.|.|.|....:|..| .|:||||:.:.|..||:.|.:..:     ||.|..|:....|... ..
Zfish   430 TYCEKSFKHPNSLKLH-ERLHTGEKPYSCEHCGKRFPSSGD-----RTRHLAVHSEVKSYKCPKC 488

  Fly   526 NQQLQQAHHHQAGQQTHPQTITVVSNPGNSTLLTVSTTDANGVARPQ---FVCRECGSAFNSREA 587
            :::.:..:..|:.|..|...........:.....::...|:.|...:   :.|.:||.||.....
Zfish   489 DRRFRFKNSLQSHQVMHTGERPFHCKKCDRDFARLANLKAHSVVHTEERSYSCSQCGQAFKCSST 553

  Fly   588 LALHLRLHTGDKSLMTDLCALTAALPGHFLSTASLNPGTVVTANPNLVGQSPVPVQIISSTGQVM 652
            |..|:.:|:....|....|..|............::.|              :.|...:..|:.:
Zfish   554 LKSHMIIHSSKTLLDCTTCGKTFTRHDTLKRHQDIHAG--------------IKVYKCTDCGKCL 604

  Fly   653 SQTTLVQAANSTHPQAVVTAVPTMPVHGQQQHLQHVAQQQQ----QQQQQQQQQQQHVVSVAPAN 713
            |..:.::    .|          |..|...:.:.:..:.::    ....|:.:|..|       :
Zfish   605 SSASCLK----LH----------MEGHSGNKKMYYCDECEKSFSSMSYLQKHRQMAH-------S 648

  Fly   714 KPKSHFCASCGKGFAAKHGLMQHNRRHPNGGCTVRTHVC-ECGKAFFQKNHLMLHQRQHLETKP 776
            ..|...|..||:.|.:...|:.|..:|...    ..|.| ||||.|.:|..|..|.:.|.|.:|
Zfish   649 DEKPFVCFECGESFNSDGKLVTHQLQHSGR----MDHACTECGKKFARKETLRRHVKAHSEERP 708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cgNP_001097306.2 COG5048 287..>371 CDD:227381 35/111 (32%)
C2H2 Zn finger 294..314 CDD:275368 9/47 (19%)
zf-H2C2_2 306..331 CDD:463886 14/52 (27%)
C2H2 Zn finger 322..342 CDD:275368 11/19 (58%)
C2H2 Zn finger 350..370 CDD:275368 5/19 (26%)
C2H2 Zn finger 378..398 CDD:275368 6/19 (32%)
C2H2 Zn finger 406..426 CDD:275368 5/19 (26%)
C2H2 Zn finger 434..454 CDD:275368 7/19 (37%)
C2H2 Zn finger 461..482 CDD:275368 8/20 (40%)
C2H2 Zn finger 490..509 CDD:275368 4/18 (22%)
C2H2 Zn finger 575..595 CDD:275368 7/19 (37%)
C2H2 Zn finger 720..740 CDD:275368 6/19 (32%)
C2H2 Zn finger 752..771 CDD:275368 9/19 (47%)
si:ch211-119o8.6NP_001108212.1 RING_Ubox 9..50 CDD:473075
C2H2 Zn finger 205..225 CDD:275370 4/19 (21%)
C2H2 Zn finger 233..253 CDD:275368 9/19 (47%)
COG5048 257..676 CDD:227381 112/459 (24%)
C2H2 Zn finger 261..281 CDD:275368 0/19 (0%)
C2H2 Zn finger 289..309 CDD:275368 11/19 (58%)
C2H2 Zn finger 317..337 CDD:275368 5/19 (26%)
C2H2 Zn finger 345..362 CDD:275368 5/16 (31%)
C2H2 Zn finger 373..393 CDD:275368 5/19 (26%)
C2H2 Zn finger 401..421 CDD:275368 7/19 (37%)
C2H2 Zn finger 429..449 CDD:275368 8/20 (40%)
C2H2 Zn finger 457..477 CDD:275368 7/24 (29%)
C2H2 Zn finger 485..505 CDD:275368 2/19 (11%)
C2H2 Zn finger 513..533 CDD:275368 2/19 (11%)
C2H2 Zn finger 541..561 CDD:275368 7/19 (37%)
C2H2 Zn finger 569..589 CDD:275368 2/19 (11%)
C2H2 Zn finger 597..614 CDD:275368 3/30 (10%)
C2H2 Zn finger 626..647 CDD:275368 2/20 (10%)
C2H2 Zn finger 655..675 CDD:275368 6/19 (32%)
C2H2 Zn finger 683..703 CDD:275368 9/19 (47%)
C2H2 Zn finger 711..731 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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