DRSC/TRiP Functional Genomics Resources

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Protein Alignment cg and drll.1

DIOPT Version :9

Sequence 1:NP_001097306.2 Gene:cg / 36571 FlyBaseID:FBgn0000289 Length:837 Species:Drosophila melanogaster
Sequence 2:NP_001159917.1 Gene:drll.1 / 555453 ZFINID:ZDB-GENE-060531-124 Length:411 Species:Danio rerio


Alignment Length:360 Identity:110/360 - (30%)
Similarity:160/360 - (44%) Gaps:93/360 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   270 KTELQESMHFSETDATIKKE-RPYSCDECGKSFLLKHHLTTHARVHTGERPHICTHCGKSFAHKH 333
            ||.||...|.     |:..| :||.||:|.||:..:.||..|.::||||:||.|.||||||..:.
Zfish   102 KTRLQLRSHM-----TLHPEYKPYKCDQCEKSYGREDHLQRHMKLHTGEKPHKCEHCGKSFPMRD 161

  Fly   334 CLNTHLLLHSTERPYQCQECKKSFTLKHHLLTHSRVHSRERPFVCQECGRAFPLKRHLVTHSKFH 398
            .|.:||::||..:||.|.:|.|.||||.....|..:|:.|||:.|.:||:.||.::.|..|.:||
Zfish   162 LLRSHLMVHSEVKPYTCDQCGKGFTLKKRYNEHMNIHTGERPYTCDQCGKGFPYEQSLNLHMRFH 226

  Fly   399 AGERPYVCEECGESFAQENHLIMHSRFHGSLNPFVCAECGASF---------------PRKFQ-- 446
            .||:|:.|::||:||:|:....:|.:.|.....:.|.:||.||               .:.|.  
Zfish   227 RGEKPFTCDQCGQSFSQKGGYNIHMKIHTGEKSYTCDQCGMSFRHGSSLKLHMTHHTGEKPFHCD 291

  Fly   447 -----------LVNHGRIHGKIP-HSCTVCGKEFLQKRTLVSHMRRVHTGEQAHPCVSCGEGFLT 499
                       |.||.:.|.|.. :||..|||.|.|.|.|..|.:| |:..:...|..||:.:.|
Zfish   292 QCDKCYSTALFLKNHIKTHDKAQIYSCFTCGKTFNQLRGLRLHEKR-HSLTKPFMCFDCGKCYFT 355

  Fly   500 KAELHQHVRTAHNGVNPNTSSATIIANQQLQQAHHHQAGQQTHPQTITVVSNPGNSTLLTVSTTD 564
            ..||.||: ..|:...|                                                
Zfish   356 DTELKQHL-PVHSNERP------------------------------------------------ 371

  Fly   565 ANGVARPQFVCRECGSAFNSREALALHLRLHTGDK 599
                    ::|..|..:|....:|.:|.:.|.|:|
Zfish   372 --------YMCSLCYKSFPRMGSLIVHEKTHNGEK 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cgNP_001097306.2 COG5048 287..>371 CDD:227381 39/84 (46%)
C2H2 Zn finger 294..314 CDD:275368 8/19 (42%)
zf-H2C2_2 306..331 CDD:290200 16/24 (67%)
C2H2 Zn finger 322..342 CDD:275368 10/19 (53%)
C2H2 Zn finger 350..370 CDD:275368 8/19 (42%)
zf-H2C2_2 362..385 CDD:290200 8/22 (36%)
C2H2 Zn finger 378..398 CDD:275368 7/19 (37%)
zf-H2C2_2 390..415 CDD:290200 12/24 (50%)
C2H2 Zn finger 406..426 CDD:275368 7/19 (37%)
SIR2 <425..>465 CDD:294129 14/68 (21%)
C2H2 Zn finger 434..454 CDD:275368 9/47 (19%)
C2H2 Zn finger 461..482 CDD:275368 10/20 (50%)
C2H2 Zn finger 490..509 CDD:275368 8/18 (44%)
lambda-1 491..>603 CDD:212564 17/109 (16%)
C2H2 Zn finger 575..595 CDD:275368 5/19 (26%)
C2H2 Zn finger 720..740 CDD:275368
C2H2 Zn finger 752..771 CDD:275368
drll.1NP_001159917.1 C2H2 Zn finger 42..58 CDD:275368
zf-H2C2_2 50..73 CDD:290200
C2H2 Zn finger 66..86 CDD:275368
C2H2 Zn finger 94..114 CDD:275368 6/16 (38%)
COG5048 <99..383 CDD:227381 105/343 (31%)
C2H2 Zn finger 122..142 CDD:275368 8/19 (42%)
zf-H2C2_2 134..157 CDD:290200 14/22 (64%)
C2H2 Zn finger 150..170 CDD:275368 10/19 (53%)
C2H2 Zn finger 178..198 CDD:275368 8/19 (42%)
C2H2 Zn finger 206..226 CDD:275368 7/19 (37%)
zf-H2C2_2 218..243 CDD:290200 12/24 (50%)
C2H2 Zn finger 234..254 CDD:275368 7/19 (37%)
C2H2 Zn finger 262..282 CDD:275368 5/19 (26%)
C2H2 Zn finger 290..310 CDD:275368 3/19 (16%)
C2H2 Zn finger 318..338 CDD:275368 10/20 (50%)
C2H2 Zn finger 346..366 CDD:275368 8/20 (40%)
C2H2 Zn finger 374..394 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595227
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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