DRSC/TRiP Functional Genomics Resources

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Protein Alignment cg and LOC549508

DIOPT Version :10

Sequence 1:NP_001097306.2 Gene:cg / 36571 FlyBaseID:FBgn0000289 Length:837 Species:Drosophila melanogaster
Sequence 2:XP_031759247.1 Gene:LOC549508 / 549508 XenbaseID:XB-GENE-29098987 Length:1464 Species:Xenopus tropicalis


Alignment Length:667 Identity:202/667 - (30%)
Similarity:294/667 - (44%) Gaps:129/667 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 ECNE----ILIKRAIAAGHHQTHTITAADGSHHHASGGTPSFCSVGGATTLLGDILPGISVQVQK 240
            ||:|    ...||.:.. |.||||            |..|..|:..|.:         ..||.:.
 Frog   604 ECSECGKSFRFKRQLTL-HLQTHT------------GEKPFVCTECGKS---------FRVQSEL 646

  Fly   241 VIQGLEDNEDSQGEAPNLKLEPGTLELSPKTELQESMHFSETDATIKKERPYSCDECGKSFLLKH 305
            .:.    .:...||.|....|.|.   |.:.:.|.::||.    |...|:|:.|.||||.|.:|.
 Frog   647 TVH----LQTHTGEKPFDCSECGK---SFRVKRQLTLHFQ----THTGEKPFDCSECGKRFRVKR 700

  Fly   306 HLTTHARVHTGERPHICTHCGKSFAHKHCLNTHLLLHSTERPYQCQECKKSFTLKHHLLTHSRVH 370
            .||.|.::||||:|.:||.|||||..:..|..||..|:.|:|:.|.||.|||.:|..|..|.:.|
 Frog   701 QLTLHLQIHTGEKPFVCTECGKSFRVQGKLTVHLQTHTGEKPFDCSECGKSFRVKSQLNLHLQTH 765

  Fly   371 SRERPFVCQECGRAFPLKRHLVTHSKFHAGERPYVCEECGESFAQENHLIMHSRFHGSLNPFVCA 435
            :.|:||.|.|||::|.:|..|..|.:.|.||:|:.|.|||:||..::.|.:|.:.|....||.|:
 Frog   766 TGEKPFDCSECGKSFRVKHQLTLHLQTHTGEKPFDCSECGKSFRVKHQLTLHLQTHTGEKPFDCS 830

  Fly   436 ECGASFPRKFQLVNHGRIH-GKIPHSCTVCGKEFLQKRTLVSHMRRVHTGEQAHPCVSCGEGFLT 499
            |||.||..|.||..|.:|| |:.|..||.|||.|..|..|..|: :.||||:...|..||:.|..
 Frog   831 ECGKSFRVKRQLTLHLQIHTGEKPFVCTECGKSFRVKGKLTVHL-QTHTGEKPFDCSECGKSFRV 894

  Fly   500 KAELHQHVRTAHNGVNPNTSSATIIANQQLQQAHHHQAGQQTHPQTITVVSNPGNSTLLTVSTTD 564
            |.:|..|::| |.|..|...|...::.:..:|...|   .|||                      
 Frog   895 KRQLTLHLQT-HTGEKPFDCSECGMSFRVKRQLTIH---LQTH---------------------- 933

  Fly   565 ANGVARPQFVCRECGSAFNSREALALHLRLHTGDKSLMTDLCA--------LTAALPGHFLSTAS 621
               .....|.|||||.:|..:..|.|||:.|||:|......|.        ||..|..|    ..
 Frog   934 ---TGEKPFDCRECGKSFRVKRQLTLHLQTHTGEKPFDCSECGKSFKVKRQLTLHLQIH----TG 991

  Fly   622 LNPGTVVTANPNLVGQSPVPVQIISSTGQ-----------VMSQTTLVQAANSTHPQAVVTAVPT 675
            ..|........:...|..:.|.:.:.||:           ..|:.:|     |:|.:...::..|
 Frog   992 EKPFVCTECGKSFRVQGKLTVHLQTHTGEKPFVCTECGKSFRSKRSL-----SSHQKVHKSSTAT 1051

  Fly   676 MPVH-GQQQHLQHVAQQQQQQQ--------------QQQQQQQQHVVSVAPANKPKSHFCASCGK 725
            ..:| |::|....::....|::              ::...:...::........|...|..|||
 Frog  1052 ENLHIGKKQCFSAMSIPDSQKELPSVIKHFKCPECGRRYSSKGSLIIHQRVHTGEKPFMCTECGK 1116

  Fly   726 GFAAKHGLMQHNRRHPNGG---CTVRTHVCECGKAFFQKNHLMLHQRQHLETKP--------AIS 779
            .|:.|:||:.|.|.|....   ||      ||||.|.:||:|::||..|...||        ..|
 Frog  1117 NFSKKYGLVVHQRVHTGEKPFMCT------ECGKRFTEKNYLIIHQTLHTGEKPFTCTECGKGFS 1175

  Fly   780 QQQEAATQQQLATAGEQ 796
            ::::....|::.| ||:
 Frog  1176 EKRKCVIHQRVHT-GEK 1191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cgNP_001097306.2 COG5048 287..>371 CDD:227381 39/83 (47%)
C2H2 Zn finger 294..314 CDD:275368 10/19 (53%)
zf-H2C2_2 306..331 CDD:463886 15/24 (63%)
C2H2 Zn finger 322..342 CDD:275368 10/19 (53%)
C2H2 Zn finger 350..370 CDD:275368 9/19 (47%)
C2H2 Zn finger 378..398 CDD:275368 8/19 (42%)
C2H2 Zn finger 406..426 CDD:275368 8/19 (42%)
C2H2 Zn finger 434..454 CDD:275368 10/19 (53%)
C2H2 Zn finger 461..482 CDD:275368 9/20 (45%)
C2H2 Zn finger 490..509 CDD:275368 7/18 (39%)
C2H2 Zn finger 575..595 CDD:275368 10/19 (53%)
C2H2 Zn finger 720..740 CDD:275368 10/19 (53%)
C2H2 Zn finger 752..771 CDD:275368 10/18 (56%)
LOC549508XP_031759247.1 C2H2 Zn finger 183..203 CDD:275368
C2H2 Zn finger 210..230 CDD:275368
C2H2 Zn finger 238..258 CDD:275368
C2H2 Zn finger 298..318 CDD:275368
C2H2 Zn finger 326..346 CDD:275368
C2H2 Zn finger 354..374 CDD:275368
C2H2 Zn finger 382..402 CDD:275368
C2H2 Zn finger 410..430 CDD:275368
COG5048 <429..614 CDD:227381 3/9 (33%)
C2H2 Zn finger 438..458 CDD:275368
C2H2 Zn finger 465..485 CDD:275368
C2H2 Zn finger 493..513 CDD:275368
C2H2 Zn finger 521..541 CDD:275368
COG5048 545..949 CDD:227381 142/407 (35%)
C2H2 Zn finger 549..569 CDD:275368
C2H2 Zn finger 577..597 CDD:275368
C2H2 Zn finger 605..625 CDD:275368 6/20 (30%)
C2H2 Zn finger 633..653 CDD:275368 4/32 (13%)
C2H2 Zn finger 661..681 CDD:275368 6/26 (23%)
C2H2 Zn finger 689..709 CDD:275368 10/19 (53%)
C2H2 Zn finger 717..737 CDD:275368 10/19 (53%)
C2H2 Zn finger 745..765 CDD:275368 9/19 (47%)
C2H2 Zn finger 773..793 CDD:275368 8/19 (42%)
C2H2 Zn finger 801..821 CDD:275368 8/19 (42%)
C2H2 Zn finger 829..849 CDD:275368 10/19 (53%)
C2H2 Zn finger 857..877 CDD:275368 9/20 (45%)
C2H2 Zn finger 885..905 CDD:275368 8/20 (40%)
C2H2 Zn finger 913..933 CDD:275368 4/22 (18%)
C2H2 Zn finger 941..961 CDD:275368 10/19 (53%)
COG5048 965..1346 CDD:227381 52/243 (21%)
C2H2 Zn finger 969..989 CDD:275368 4/19 (21%)
C2H2 Zn finger 997..1017 CDD:275368 2/19 (11%)
C2H2 Zn finger 1025..1045 CDD:275368 4/24 (17%)
C2H2 Zn finger 1083..1103 CDD:275368 0/19 (0%)
C2H2 Zn finger 1111..1131 CDD:275368 10/19 (53%)
C2H2 Zn finger 1139..1159 CDD:275368 12/25 (48%)
C2H2 Zn finger 1167..1187 CDD:275368 2/19 (11%)
C2H2 Zn finger 1195..1215 CDD:275368
C2H2 Zn finger 1223..1243 CDD:275368
C2H2 Zn finger 1251..1271 CDD:275368
C2H2 Zn finger 1279..1299 CDD:275368
C2H2 Zn finger 1307..1327 CDD:275368
C2H2 Zn finger 1335..1355 CDD:275368
C2H2 Zn finger 1363..1383 CDD:275368
zf-H2C2_2 1375..1399 CDD:463886
C2H2 Zn finger 1391..1411 CDD:275368
zf-H2C2_2 1403..1427 CDD:463886
C2H2 Zn finger 1419..1439 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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