DRSC/TRiP Functional Genomics Resources

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Protein Alignment cg and CG1792

DIOPT Version :9

Sequence 1:NP_001097306.2 Gene:cg / 36571 FlyBaseID:FBgn0000289 Length:837 Species:Drosophila melanogaster
Sequence 2:NP_651878.1 Gene:CG1792 / 43727 FlyBaseID:FBgn0039860 Length:372 Species:Drosophila melanogaster


Alignment Length:323 Identity:80/323 - (24%)
Similarity:127/323 - (39%) Gaps:87/323 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 EECNEILIKRAIAAGHHQTHTITAADGSHHHASGG-----TPSFCS----------------VGG 222
            ||.|.:::        ||...:|..     ...||     .|..||                :..
  Fly    23 EEPNSVML--------HQIEVLTGL-----FLLGGPGNELPPFICSPCELDLQTAIAFRERVIRT 74

  Fly   223 ATTL-----LG--DILPGISVQVQKVIQG------------------LEDNED-----SQGEAPN 257
            ..||     ||  :::...:|.|:|.||.                  ||:.|:     .|.|.|.
  Fly    75 QKTLQESPNLGNAELIESFAVGVEKEIQYAEEVTEIEVIDLLPEEHLLEETEEPYEICEQNEQPQ 139

  Fly   258 LKL--EPGTLELSPKT--ELQESMHFSE-TDAT--------------IKKE---RPYSCDECGKS 300
            :|:  :...|..|.||  .:..|:.|:: :.||              :|:|   |...|::||:.
  Fly   140 VKVPAQEKKLRRSTKTTPTVFTSVKFADNSQATRTQWSRLTEDEVVALKRERRKRDCICEQCGRH 204

  Fly   301 FLLKHHLTTHARVHTGERPHICTHCGKSFAHKHCLNTHLLLHSTERPYQCQECKKSFTLKHHLLT 365
            |....:...|...|||.:...|..|.:.|.....|..|..||:....:||:.|:.:::.....:.
  Fly   205 FTCPSNFKLHLLRHTGVKSFACDQCSQQFYTATLLRRHQELHAGNALFQCRYCEATYSNASGRIQ 269

  Fly   366 HSRV-HSRERPFVCQECGRAFPLKRHLVTHSKFHAGERPYVCEECGESFAQENHLIMHSRFHG 427
            |.|: |:..:||.|:||.::|.:...|.||...|.|.|.:.|:.|..||.:.:||..|.|..|
  Fly   270 HERMRHTNVKPFTCKECNKSFAMSGKLRTHMLSHTGVRAFHCDSCQVSFVRRSHLTSHYRSKG 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cgNP_001097306.2 COG5048 287..>371 CDD:227381 23/87 (26%)
C2H2 Zn finger 294..314 CDD:275368 5/19 (26%)
zf-H2C2_2 306..331 CDD:290200 7/24 (29%)
C2H2 Zn finger 322..342 CDD:275368 5/19 (26%)
C2H2 Zn finger 350..370 CDD:275368 4/20 (20%)
zf-H2C2_2 362..385 CDD:290200 8/23 (35%)
C2H2 Zn finger 378..398 CDD:275368 7/19 (37%)
zf-H2C2_2 390..415 CDD:290200 10/24 (42%)
C2H2 Zn finger 406..426 CDD:275368 8/19 (42%)
SIR2 <425..>465 CDD:294129 1/3 (33%)
C2H2 Zn finger 434..454 CDD:275368
C2H2 Zn finger 461..482 CDD:275368
C2H2 Zn finger 490..509 CDD:275368
lambda-1 491..>603 CDD:212564
C2H2 Zn finger 575..595 CDD:275368
C2H2 Zn finger 720..740 CDD:275368
C2H2 Zn finger 752..771 CDD:275368
CG1792NP_651878.1 zf-AD 6..80 CDD:214871 13/69 (19%)
C2H2 Zn finger 198..218 CDD:275368 5/19 (26%)
C2H2 Zn finger 226..243 CDD:275368 4/16 (25%)
C2H2 Zn finger 254..275 CDD:275368 4/20 (20%)
zf-C2H2 281..303 CDD:278523 8/21 (38%)
C2H2 Zn finger 283..303 CDD:275368 7/19 (37%)
zf-H2C2_2 296..320 CDD:290200 10/23 (43%)
C2H2 Zn finger 311..329 CDD:275368 7/17 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24388
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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