DRSC/TRiP Functional Genomics Resources

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Protein Alignment cg and CG4424

DIOPT Version :9

Sequence 1:NP_001097306.2 Gene:cg / 36571 FlyBaseID:FBgn0000289 Length:837 Species:Drosophila melanogaster
Sequence 2:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster


Alignment Length:230 Identity:74/230 - (32%)
Similarity:106/230 - (46%) Gaps:32/230 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 VQKVIQGLEDN-----EDSQGEAPNLK-LEPGTLELSPKTELQESMHFSETDATIKKERPYSCDE 296
            |::|:|....:     |..|.|.|..: ||.|.  .|.:..::|:.|     ...:||||     
  Fly   103 VKEVVQQTRPSTPPPIETEQLEPPEDEVLEEGV--WSTEDPIEETPH-----GPAEKERP----- 155

  Fly   297 CGKSFLLKHHL--------TTHARVHTGE---RPHICTHCGKSFAHKHCLNTHLLLHSTERPYQC 350
               :.|....|        :|......|.   :.|:|..||..:..|..|:||:..|:.||||:|
  Fly   156 ---TVLTVEMLPAPYPPPASTPPPAPAGAVKGKLHVCAICGNGYPRKSTLDTHMRRHNDERPYEC 217

  Fly   351 QECKKSFTLKHHLLTHSRVHSRERPFVCQECGRAFPLKRHLVTHSKFHAGERPYVCEECGESFAQ 415
            :.|.|||.:.:.|..|.|.|:..:|:.||.|.|.|..:..||.|.:.|..||||.|:.||:.|..
  Fly   218 EICHKSFHVNYQLKRHIRQHTGAKPYTCQYCQRNFADRTSLVKHERTHRNERPYACKTCGKKFTY 282

  Fly   416 ENHLIMHSRFHGSLNPFVCAECGASFPRKFQLVNH 450
            .:.|.||.:.|....|.:|..|..||.|...||.|
  Fly   283 ASVLKMHYKTHTGEKPHICQLCNKSFARIHNLVAH 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cgNP_001097306.2 COG5048 287..>371 CDD:227381 29/94 (31%)
C2H2 Zn finger 294..314 CDD:275368 3/27 (11%)
zf-H2C2_2 306..331 CDD:290200 7/35 (20%)
C2H2 Zn finger 322..342 CDD:275368 7/19 (37%)
C2H2 Zn finger 350..370 CDD:275368 8/19 (42%)
zf-H2C2_2 362..385 CDD:290200 9/22 (41%)
C2H2 Zn finger 378..398 CDD:275368 8/19 (42%)
zf-H2C2_2 390..415 CDD:290200 12/24 (50%)
C2H2 Zn finger 406..426 CDD:275368 7/19 (37%)
SIR2 <425..>465 CDD:294129 10/26 (38%)
C2H2 Zn finger 434..454 CDD:275368 8/17 (47%)
C2H2 Zn finger 461..482 CDD:275368
C2H2 Zn finger 490..509 CDD:275368
lambda-1 491..>603 CDD:212564
C2H2 Zn finger 575..595 CDD:275368
C2H2 Zn finger 720..740 CDD:275368
C2H2 Zn finger 752..771 CDD:275368
CG4424NP_650859.3 zf-AD 10..92 CDD:285071
C2H2 Zn finger 189..209 CDD:275368 7/19 (37%)
DUF45 <204..281 CDD:302795 33/76 (43%)
COG5048 210..>345 CDD:227381 44/108 (41%)
C2H2 Zn finger 217..237 CDD:275368 8/19 (42%)
C2H2 Zn finger 245..265 CDD:275368 8/19 (42%)
zf-H2C2_2 257..282 CDD:290200 12/24 (50%)
C2H2 Zn finger 273..293 CDD:275368 7/19 (37%)
zf-H2C2_2 286..310 CDD:290200 9/23 (39%)
C2H2 Zn finger 301..320 CDD:275368 8/17 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440481
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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