DRSC/TRiP Functional Genomics Resources

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Protein Alignment cg and CG5245

DIOPT Version :9

Sequence 1:NP_001097306.2 Gene:cg / 36571 FlyBaseID:FBgn0000289 Length:837 Species:Drosophila melanogaster
Sequence 2:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster


Alignment Length:509 Identity:136/509 - (26%)
Similarity:191/509 - (37%) Gaps:124/509 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   286 IKKERP-------YSCDECGKSFLLKHHLTTHARVHTGERPHICTHCGKSFAHKHCLNTHLLLHS 343
            |.|:||       :.|.:|.|:|..|.:|.:|.|:|..|||..|:||.|||..:.....|||.|.
  Fly    69 IAKKRPLRKQTDTFKCTQCQKTFTRKENLESHLRLHAEERPFECSHCSKSFGRRTHYKRHLLKHE 133

  Fly   344 TERPYQCQECKKSFTLKHHLLTHSRVHSRERPFVCQECGRAFPLKRHLVTHSKFHAGERPYVCEE 408
             :||::|..|.|:||....|..|...|:.||||.|.:|..:|..|.||..|.:.|:.|||:.|..
  Fly   134 -KRPHKCSHCSKTFTQNSSLKQHLHEHTGERPFKCTQCSTSFARKSHLQVHLRTHSEERPFECTH 197

  Fly   409 CGESFAQENHLIMHSRFHGSLNPFVCAECGASFPRKFQLVNHGRIHGKIPHSCTVCGKEFLQKRT 473
            |.::|...:||..|.|.|....||.|:.|..||..:..|..|...|.:....||.|.|.|||..:
  Fly   198 CEKAFKNNSHLQEHLRTHQEARPFKCSHCSKSFKLRSILQKHLLTHAERSFKCTQCPKTFLQNDS 262

  Fly   474 LVSHMRRVHTGEQAHPCVSCGEGFLTKAELHQHVRTAHNGVNP---NTSSATIIANQQLQQAHHH 535
            |..|: |||.||....|..|.|.|...:.|..|: ..|.|..|   :..||| .|.:.|.:.|  
  Fly   263 LQIHL-RVHAGEDPFKCPHCSETFARNSRLQLHL-LEHAGKEPLKCSQCSAT-FAMRSLYRVH-- 322

  Fly   536 QAGQQTHPQTITVVSNPGNSTLLTVSTTDANGVARPQFVCRECGSAFNSREALALHLRLHTGDKS 600
                                  :.:.|.:.      |:.|.||..:|..:..|..|.::|||::.
  Fly   323 ----------------------VRLHTRER------QYKCAECSKSFFKKSHLVEHQQVHTGERP 359

  Fly   601 LMTDLCALTAALPGHFLSTASLNPGTVVTANPNLVGQSPVPVQIISSTGQVMSQTTLVQAANSTH 665
            .....|........|                        :.|.::...|:.:.:.:.........
  Fly   360 FKCTHCFKDFKCRTH------------------------LRVHMLDHIGEKVPKCSYCSKEFKLS 400

  Fly   666 PQAVVTAVPTMPVHGQQQHLQ-HVAQQQQQQQQQQQQQQQHVVSVAPANKPKSHFCASCGKGFAA 729
            .|.:|             ||| |..:.|.:                         |..|.|.:..
  Fly   401 SQLLV-------------HLQEHTGKNQFE-------------------------CPHCSKSYTT 427

  Fly   730 KHGLMQHNRRHPNGGCTVRTHVCE-------CGKAFFQKNHLMLHQRQHLETKP 776
            ...|..|          :|||..|       |.|.|.:......|.|.|...||
  Fly   428 SSTLHMH----------LRTHTGELPFKCSHCSKLFARSAEHQEHLRTHTGEKP 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cgNP_001097306.2 COG5048 287..>371 CDD:227381 34/90 (38%)
C2H2 Zn finger 294..314 CDD:275368 8/19 (42%)
zf-H2C2_2 306..331 CDD:290200 13/24 (54%)
C2H2 Zn finger 322..342 CDD:275368 9/19 (47%)
C2H2 Zn finger 350..370 CDD:275368 7/19 (37%)
zf-H2C2_2 362..385 CDD:290200 9/22 (41%)
C2H2 Zn finger 378..398 CDD:275368 7/19 (37%)
zf-H2C2_2 390..415 CDD:290200 10/24 (42%)
C2H2 Zn finger 406..426 CDD:275368 7/19 (37%)
SIR2 <425..>465 CDD:294129 12/39 (31%)
C2H2 Zn finger 434..454 CDD:275368 6/19 (32%)
C2H2 Zn finger 461..482 CDD:275368 10/20 (50%)
C2H2 Zn finger 490..509 CDD:275368 6/18 (33%)
lambda-1 491..>603 CDD:212564 25/114 (22%)
C2H2 Zn finger 575..595 CDD:275368 6/19 (32%)
C2H2 Zn finger 720..740 CDD:275368 5/19 (26%)
C2H2 Zn finger 752..771 CDD:275368 6/25 (24%)
CG5245NP_650197.1 COG5048 74..478 CDD:227381 133/504 (26%)
C2H2 Zn finger 84..104 CDD:275368 8/19 (42%)
C2H2 Zn finger 112..132 CDD:275368 9/19 (47%)
C2H2 Zn finger 139..159 CDD:275368 7/19 (37%)
C2H2 Zn finger 167..187 CDD:275368 7/19 (37%)
zf-H2C2_2 179..204 CDD:290200 10/24 (42%)
C2H2 Zn finger 195..215 CDD:275368 7/19 (37%)
C2H2 Zn finger 223..243 CDD:275368 6/19 (32%)
C2H2 Zn finger 250..270 CDD:275368 10/20 (50%)
C2H2 Zn finger 278..298 CDD:275368 6/20 (30%)
C2H2 Zn finger 306..326 CDD:275368 6/44 (14%)
C2H2 Zn finger 334..354 CDD:275368 6/19 (32%)
C2H2 Zn finger 362..382 CDD:275368 3/43 (7%)
C2H2 Zn finger 390..410 CDD:275368 5/32 (16%)
C2H2 Zn finger 418..438 CDD:275368 6/29 (21%)
C2H2 Zn finger 446..466 CDD:275368 5/19 (26%)
C2H2 Zn finger 474..492 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440486
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D42822at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.940

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