DRSC/TRiP Functional Genomics Resources

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Protein Alignment cg and M1BP

DIOPT Version :10

Sequence 1:NP_001097306.2 Gene:cg / 36571 FlyBaseID:FBgn0000289 Length:837 Species:Drosophila melanogaster
Sequence 2:NP_649825.1 Gene:M1BP / 41042 FlyBaseID:FBgn0037621 Length:418 Species:Drosophila melanogaster


Alignment Length:199 Identity:58/199 - (29%)
Similarity:87/199 - (43%) Gaps:7/199 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 LLGDILPGISVQVQKVIQGLEDNEDSQGEAPNLKLEPGTLELSPKTELQESMHFSETDATIKKER 290
            ::||:...........:..|::..|.:.|..|:.::..:|...||....::........      
  Fly   192 IVGDVNDAYVYDSDDEVAVLDNVLDDEYEHENIVVKKCSLPPKPKVRSDDARRRGTGGV------ 250

  Fly   291 PYSCDECGKSFLLKHHLTTHARVHTGERPHICTHCGKSFAHKHCLNTHLLLHSTERPYQCQECKK 355
             |.|::||.....:.....|.|.|.|::...|..|...|.....|..|:..|:.|||:.|:.|.:
  Fly   251 -YICEQCGNHIKGRMAFELHCRRHRGDKQFGCELCQSRFCTTSELKRHMRKHTGERPFACKYCGR 314

  Fly   356 SFTLKHHLLTHSRVHSRERPFVCQECGRAFPLKRHLVTHSKFHAGERPYVCEECGESFAQENHLI 420
            .||.....:.|.|.|:.|||:||..||:||.....|..|...|:|||.|.||.|.:||....||.
  Fly   315 CFTDYTTRVKHERTHTNERPYVCGTCGKAFTTGYILKNHMLIHSGERAYRCELCDKSFMLPTHLS 379

  Fly   421 MHSR 424
            .|.|
  Fly   380 THFR 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cgNP_001097306.2 COG5048 287..>371 CDD:227381 23/83 (28%)
C2H2 Zn finger 294..314 CDD:275368 5/19 (26%)
zf-H2C2_2 306..331 CDD:463886 7/24 (29%)
C2H2 Zn finger 322..342 CDD:275368 5/19 (26%)
C2H2 Zn finger 350..370 CDD:275368 6/19 (32%)
C2H2 Zn finger 378..398 CDD:275368 7/19 (37%)
C2H2 Zn finger 406..426 CDD:275368 9/19 (47%)
C2H2 Zn finger 434..454 CDD:275368
C2H2 Zn finger 461..482 CDD:275368
C2H2 Zn finger 490..509 CDD:275368
C2H2 Zn finger 575..595 CDD:275368
C2H2 Zn finger 720..740 CDD:275368
C2H2 Zn finger 752..771 CDD:275368
M1BPNP_649825.1 zf-AD 13..84 CDD:214871
C2H2 Zn finger 253..273 CDD:275368 5/19 (26%)
COG5048 276..>331 CDD:227381 16/54 (30%)
C2H2 Zn finger 281..301 CDD:275368 5/19 (26%)
zf-H2C2_2 293..317 CDD:463886 8/23 (35%)
C2H2 Zn finger 309..329 CDD:275368 6/19 (32%)
zf-H2C2_2 324..346 CDD:463886 12/21 (57%)
C2H2 Zn finger 337..357 CDD:275368 7/19 (37%)
zf-H2C2_2 350..372 CDD:463886 10/21 (48%)
C2H2 Zn finger 365..383 CDD:275368 8/17 (47%)
Blue background indicates that the domain is not in the aligned region.

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