DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cg and ouib

DIOPT Version :10

Sequence 1:NP_001097306.2 Gene:cg / 36571 FlyBaseID:FBgn0000289 Length:837 Species:Drosophila melanogaster
Sequence 2:NP_649822.2 Gene:ouib / 41039 FlyBaseID:FBgn0037618 Length:312 Species:Drosophila melanogaster


Alignment Length:174 Identity:58/174 - (33%)
Similarity:85/174 - (48%) Gaps:18/174 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   264 TLELSPKTELQE---------SMHFSETDATIKKERPYSCDECGKSFLLKHHLTTHARVHTGERP 319
            ||....|.:|:|         |....:. :|...::.|.|:.||.....|.....|.|.|.||||
  Fly   131 TLNRDAKAQLREDGIDEKCVPSQKIIKV-STKLDDQIYICELCGTHATSKPTFQRHMRKHRGERP 194

  Fly   320 HICTHCGKSFAHKHCLNTHLLLHSTERPYQCQECKKSFTLKHHLLTHSRVHSRERPFVCQECGR- 383
            ..|..|...|.....|..|..:|:.|:|:.|:.|:|.:......|.|.|.|:.:||:||:|||: 
  Fly   195 FGCKDCDARFLSAGELRAHHRVHTGEQPFACRFCEKRYVSYMGRLIHERTHTNDRPYVCEECGKK 259

  Fly   384 ---AFPLKRHLVTHSKFHAGERPYVCEECGESFAQENHLIMHSR 424
               |:.||.|:|    .|.|||.:.|:.|..||.::.||:.|:|
  Fly   260 FTTAYVLKNHMV----IHTGERNFRCDICDRSFQRKAHLVTHTR 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cgNP_001097306.2 COG5048 287..>371 CDD:227381 26/83 (31%)
C2H2 Zn finger 294..314 CDD:275368 6/19 (32%)
zf-H2C2_2 306..331 CDD:463886 10/24 (42%)
C2H2 Zn finger 322..342 CDD:275368 5/19 (26%)
C2H2 Zn finger 350..370 CDD:275368 6/19 (32%)
C2H2 Zn finger 378..398 CDD:275368 9/23 (39%)
C2H2 Zn finger 406..426 CDD:275368 8/19 (42%)
C2H2 Zn finger 434..454 CDD:275368
C2H2 Zn finger 461..482 CDD:275368
C2H2 Zn finger 490..509 CDD:275368
C2H2 Zn finger 575..595 CDD:275368
C2H2 Zn finger 720..740 CDD:275368
C2H2 Zn finger 752..771 CDD:275368
ouibNP_649822.2 zf-AD 5..78 CDD:214871
C2H2 Zn finger 169..189 CDD:275368 6/19 (32%)
zf-H2C2_2 182..206 CDD:463886 10/23 (43%)
C2H2 Zn finger 197..217 CDD:275368 5/19 (26%)
SFP1 <219..269 CDD:227516 19/49 (39%)
C2H2 Zn finger 225..245 CDD:275368 6/19 (32%)
C2H2 Zn finger 253..273 CDD:275368 9/23 (39%)
zf-H2C2_2 266..288 CDD:463886 10/25 (40%)
C2H2 Zn finger 281..299 CDD:275368 7/17 (41%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.