DRSC/TRiP Functional Genomics Resources

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Protein Alignment cg and znf410

DIOPT Version :9

Sequence 1:NP_001097306.2 Gene:cg / 36571 FlyBaseID:FBgn0000289 Length:837 Species:Drosophila melanogaster
Sequence 2:XP_009293316.1 Gene:znf410 / 402951 ZFINID:ZDB-GENE-040426-1817 Length:426 Species:Danio rerio


Alignment Length:420 Identity:96/420 - (22%)
Similarity:156/420 - (37%) Gaps:118/420 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 LGDILP---GISVQVQK--------VIQGLEDNEDSQGEAPNL------KLEP------------ 262
            |.|:.|   .:.||:|.        ::|.|::|:.:.....||      ..||            
Zfish    55 LSDLCPERSPVLVQLQSPAAAQTPTILQELQNNDSTSYILLNLAKGLAASAEPLVFVQDEVDEAQ 119

  Fly   263 ------GTLELSPKTELQESMHFS-----------ETDATIKKERPYSCDECGKSFLLKHHLTTH 310
                  |.:.......:||..|.|           :..||...|...||...|:.      ..:.
Zfish   120 EEVSVSGDISTPWYLRVQELAHDSLIAATRAQLARDARATANSEHLLSCASDGQK------RESS 178

  Fly   311 ARVHT-GERPHICTH--CGKSFAHKHCLNTHLLLHSTERPYQC--QECKKSFTLKHHLLTHSRVH 370
            .||.: .|:.|.|.:  |.::|.:...|..||..|..:|.::|  :.|.|||.:...|..|.|.|
Zfish   179 PRVSSRSEKIHRCPYESCCRTFTYPAHLKYHLKTHRNDRTFRCGAEGCGKSFYVLQRLQVHMRTH 243

  Fly   371 SRERPFVCQE--CGRAFPLKRHLVTHSKFHAGERPYVCE--ECGESFAQ----ENHLIMHSRFHG 427
            :.|:||:|.|  ||:.|....:|..|.:.|.||:|::||  .||.|||:    ..|:::||    
Zfish   244 NGEKPFICSENNCGKKFTTAGNLKNHRRTHTGEKPFLCEVNNCGRSFAEYSSLRKHMLVHS---- 304

  Fly   428 SLNPFVCAECGASFPRKFQLVNHGRIHGKIPHSCTVCGKEFLQKRTLVSHMRRVHTGEQAHPCVS 492
                                       |:.||.|:||||.|.|..:...||::.|:|:.:     
Zfish   305 ---------------------------GEKPHVCSVCGKTFSQSGSRNVHMKKRHSGDDS----- 337

  Fly   493 CGEGFLTKAELHQHVRTAHNGVNPNTSSATIIANQQLQQAH--HHQAGQQTHPQTITVVSNPGNS 555
                         ...|.::.::.|........::.|.|:.  ..:.|...|...:...|...:.
Zfish   338 -------------STDTGYSNIDNNGREIATCTSEALTQSSLLEEEGGVSLHHSILRTQSFCQDG 389

  Fly   556 TLLTVSTTDANGVARP--QFVCRECGSAFN 583
            |....:.||......|  :.|....|..::
Zfish   390 TCSPAAPTDPLAALAPPHELVSMTTGHTYS 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cgNP_001097306.2 COG5048 287..>371 CDD:227381 24/88 (27%)
C2H2 Zn finger 294..314 CDD:275368 3/19 (16%)
zf-H2C2_2 306..331 CDD:290200 7/27 (26%)
C2H2 Zn finger 322..342 CDD:275368 6/21 (29%)
C2H2 Zn finger 350..370 CDD:275368 8/21 (38%)
zf-H2C2_2 362..385 CDD:290200 11/24 (46%)
C2H2 Zn finger 378..398 CDD:275368 7/21 (33%)
zf-H2C2_2 390..415 CDD:290200 12/26 (46%)
C2H2 Zn finger 406..426 CDD:275368 10/25 (40%)
SIR2 <425..>465 CDD:294129 5/39 (13%)
C2H2 Zn finger 434..454 CDD:275368 0/19 (0%)
C2H2 Zn finger 461..482 CDD:275368 9/20 (45%)
C2H2 Zn finger 490..509 CDD:275368 0/18 (0%)
lambda-1 491..>603 CDD:212564 13/97 (13%)
C2H2 Zn finger 575..595 CDD:275368 1/9 (11%)
C2H2 Zn finger 720..740 CDD:275368
C2H2 Zn finger 752..771 CDD:275368
znf410XP_009293316.1 COG5048 215..>399 CDD:227381 57/232 (25%)
C2H2 Zn finger 224..243 CDD:275368 7/18 (39%)
zf-H2C2_2 236..262 CDD:290200 12/25 (48%)
C2H2 Zn finger 251..273 CDD:275368 7/21 (33%)
zf-H2C2_2 265..291 CDD:290200 11/25 (44%)
C2H2 Zn finger 281..303 CDD:275368 8/21 (38%)
zf-H2C2_2 295..320 CDD:290200 12/55 (22%)
C2H2 Zn finger 311..329 CDD:275368 8/17 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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