DRSC/TRiP Functional Genomics Resources

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Protein Alignment cg and ZNF880

DIOPT Version :10

Sequence 1:NP_001097306.2 Gene:cg / 36571 FlyBaseID:FBgn0000289 Length:837 Species:Drosophila melanogaster
Sequence 2:NP_001138906.1 Gene:ZNF880 / 400713 HGNCID:37249 Length:577 Species:Homo sapiens


Alignment Length:489 Identity:148/489 - (30%)
Similarity:199/489 - (40%) Gaps:123/489 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   289 ERPYSCDECGKSFLLKHHLTTHARVHTGERPHICTHCGKSFAHKHCLNTHLLLHSTERPYQCQEC 353
            :.||.|:||.|.|....:|..|.|:||||:|:.|..|||.|.....|..|..:|:.|:||:|.||
Human   209 DNPYKCNECDKVFSNSSNLVQHQRIHTGEKPYKCHECGKLFNRISLLARHQRIHTGEKPYKCHEC 273

  Fly   354 KKSFTLKHHLLTHSRVHSRERPFVCQECGRAFPLKRHLVTHSKFHAGERPYVCEECGESFAQENH 418
            .|.||...||..|.|:|:.|:|:.|.|||:.|....||..|.|.|:||:||.|:|||::|:..:.
Human   274 GKVFTQNSHLANHHRIHTGEKPYKCNECGKVFNRNAHLARHQKIHSGEKPYKCKECGKAFSGGSG 338

  Fly   419 LIMHSRFHGSLNPFVCAECGASFPRKFQLVNHGRIH-GKIPHSCTVCGKEFLQKRTLVSHMRRVH 482
            |..|...|.....:.|.:||..|.|...|..|.||| |:.|:.|..|||.|..|..|.:| .|:|
Human   339 LTAHLVIHTGEKLYKCNKCGKVFNRNAHLTRHQRIHTGEKPYECKECGKVFRHKFCLTNH-HRMH 402

  Fly   483 TGEQAHPCVSCGEGFLTKAELHQHVRTAHNGVNPNTSSATIIANQQLQQAHHHQAGQQTHPQTIT 547
            ||||.:.|..||:.|...:.|..|: ..|.|..|                               
Human   403 TGEQPYKCNECGKAFRDCSGLTAHL-LIHTGEKP------------------------------- 435

  Fly   548 VVSNPGNSTLLTVSTTDANGVARPQFVCRECGSAFNSREALALHLRLHTGDKSLMTDLCALTAAL 612
                                     :.|:||...|..|.:|:.|.|.|||:|....|.|      
Human   436 -------------------------YKCKECAKVFRHRLSLSNHQRFHTGEKPYRCDEC------ 469

  Fly   613 PGHFLSTASLNPGTVVTANPNLVGQSPVPVQIISSTGQVMSQTTLVQAANSTHPQAVVTAVPTMP 677
                        |...|.|.||.....:      .||:...:.:                    .
Human   470 ------------GKDFTRNSNLANHHRI------HTGEKPYKCS--------------------E 496

  Fly   678 VHGQQQHLQHVAQQQQQQQQQQQQQQQHVVSVAPANKPKSHFCASCGKGFAAKHGLMQHNRRHPN 742
            .|....|..|:|:.:|....:                 ||:.|..|||.|:.|..|.:|.|.| .
Human   497 CHKVFSHNSHLARHRQIHTGE-----------------KSYKCNECGKVFSHKLYLKKHERIH-T 543

  Fly   743 GGCTVRTHVCECGKAFFQKNHLMLHQRQHLETKP 776
            |....|.|  ||||.|.:.::|..|.|.|...||
Human   544 GEKPYRCH--ECGKDFTRNSNLANHHRIHTGEKP 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cgNP_001097306.2 COG5048 287..>371 CDD:227381 36/81 (44%)
C2H2 Zn finger 294..314 CDD:275368 8/19 (42%)
zf-H2C2_2 306..331 CDD:463886 13/24 (54%)
C2H2 Zn finger 322..342 CDD:275368 7/19 (37%)
C2H2 Zn finger 350..370 CDD:275368 10/19 (53%)
C2H2 Zn finger 378..398 CDD:275368 9/19 (47%)
C2H2 Zn finger 406..426 CDD:275368 7/19 (37%)
C2H2 Zn finger 434..454 CDD:275368 8/19 (42%)
C2H2 Zn finger 461..482 CDD:275368 9/20 (45%)
C2H2 Zn finger 490..509 CDD:275368 6/18 (33%)
C2H2 Zn finger 575..595 CDD:275368 8/19 (42%)
C2H2 Zn finger 720..740 CDD:275368 9/19 (47%)
C2H2 Zn finger 752..771 CDD:275368 8/18 (44%)
ZNF880NP_001138906.1 KRAB 7..65 CDD:214630
C2H2 Zn finger 186..206 CDD:275368
COG5048 208..542 CDD:227381 133/451 (29%)
C2H2 Zn finger 214..234 CDD:275368 8/19 (42%)
C2H2 Zn finger 242..262 CDD:275368 7/19 (37%)
C2H2 Zn finger 270..290 CDD:275368 10/19 (53%)
C2H2 Zn finger 298..318 CDD:275368 9/19 (47%)
C2H2 Zn finger 326..346 CDD:275368 7/19 (37%)
C2H2 Zn finger 354..374 CDD:275368 8/19 (42%)
C2H2 Zn finger 382..402 CDD:275368 9/20 (45%)
C2H2 Zn finger 410..430 CDD:275368 6/20 (30%)
C2H2 Zn finger 438..458 CDD:275368 8/19 (42%)
C2H2 Zn finger 466..486 CDD:275368 7/43 (16%)
C2H2 Zn finger 494..514 CDD:275368 5/39 (13%)
C2H2 Zn finger 522..542 CDD:275368 9/19 (47%)
zf-H2C2_2 534..559 CDD:463886 12/27 (44%)
C2H2 Zn finger 550..570 CDD:275368 9/21 (43%)
Blue background indicates that the domain is not in the aligned region.

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