DRSC/TRiP Functional Genomics Resources

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Protein Alignment cg and Zfp408

DIOPT Version :9

Sequence 1:NP_001097306.2 Gene:cg / 36571 FlyBaseID:FBgn0000289 Length:837 Species:Drosophila melanogaster
Sequence 2:NP_001334104.1 Gene:Zfp408 / 381410 MGIID:2685857 Length:710 Species:Mus musculus


Alignment Length:698 Identity:169/698 - (24%)
Similarity:250/698 - (35%) Gaps:187/698 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GYTWGFADNGNRAAESVLEISPNINYTVSGESMPYLLSTDGSLA-----------------VQKD 58
            |..||..::     |||||         .||.|......|.|||                 ||:.
Mouse    83 GLHWGPLED-----ESVLE---------KGEGMKTPHEEDFSLAPCGAICPRQQSSTWTSLVQEG 133

  Fly    59 VKGLTAGGKNNVV---RRMFVVNDPSFPPGTQRVITAGGASTVVKKQDNNQQVLSLDKNYLLVDP 120
              .|.:.|..::|   .::.:..|.:..||.:.::          :..:.|:.||:....|..:.
Mouse   134 --RLQSDGNASLVWIREKLHLQVDQTILPGFELLL----------RPQSPQKSLSVLHPKLEEEV 186

  Fly   121 ATAAAAAAAAGGDSGLAHHHTLTNGSIVDAKTGQTVLTAGSAAAKSHFSSIGALHLTQEECNEIL 185
            |....|:|              |...:...:..    :||......|.||    |..||:  .:|
Mouse   187 AETGEASA--------------TQEEVASPQED----SAGFCTDPGHESS----HSIQED--NML 227

  Fly   186 IKRAIAAGHHQTHTITAADGSHHH--------------------ASGGTPSFCSVGGATTLLGDI 230
            :..::.....|....:...|...|                    |:..:|.....|        :
Mouse   228 VSESVTKTEEQLFKDSQPIGLLLHDDSMDKQCLPQTPPEPQSTSAAQKSPESSEAG--------L 284

  Fly   231 LPGISVQVQKVIQGLEDNEDSQGEAPNLKLEPGT-------LELSPKTELQESMHFSETDATIKK 288
            .|....||:.......|...||..:.....||||       |..||         .....::.|.
Mouse   285 FPPEGAQVETCPAKQLDVPSSQCPSIAQTSEPGTQLPDLSGLLCSP---------LDPAGSSSKL 340

  Fly   289 ERPYSCDECGKSFLLKHHLTTHARVHTGERPHICTHCGKSFAHKHCLNTHLLLHSTERPYQCQEC 353
            .|.|.|.||.|:||...||..||.|||..:|.:||.||||::.:.....|:|.|...||:.|.:|
Mouse   341 GRRYRCGECSKAFLQLCHLKKHAFVHTDHKPFLCTECGKSYSSEESFKGHMLGHRGVRPFPCSQC 405

  Fly   354 KKSFTLKHHLLTHSRVHSRERPFVCQECGRAFPLKRHLVTHSKFHA---GERPYVCEECGESFAQ 415
            .|::..:..|..|..|||..|||||::||:.|..:..|..|.|.|.   ...|..|..||...|.
Mouse   406 DKAYGTRRDLREHQVVHSGARPFVCEQCGKTFARRPSLRLHRKTHQMPDAPSPCPCPVCGRLLAT 470

  Fly   416 ENHLIMHSRFHGSLNPFVCAECGASFPRKFQLVNHGRIH-GKIPHSCTVCGKEFLQ----KRTLV 475
            ...|..|.|.|....|::|..||.:|.::..|..|.|:| |:.|:.|..|...:.|    :|.|:
Mouse   471 RGSLRNHMRLHTGEKPYLCPHCGQAFRQRGNLQGHLRLHTGERPYQCPHCANTYPQLPELRRHLI 535

  Fly   476 SHMRRVHTGEQAHPCVSCGEGFLTKAELHQHVRTAHNGVNPNTSSATIIANQQLQQAHHHQAGQQ 540
            |     |||| |:.|..||:.......|..|.| .|:|..|                        
Mouse   536 S-----HTGE-AYLCPVCGKALRDPHTLRAHER-LHSGERP------------------------ 569

  Fly   541 THPQTITVVSNPGNSTLLTVSTTDANGVARPQFVCRECGSAFNSREALALHLRLHTGDKSLMTDL 605
                                            |.|.:|..|:.....|..||:.|..||.....:
Mouse   570 --------------------------------FRCPQCDRAYTLATKLRRHLKSHMTDKPYQCPI 602

  Fly   606 CALTAALPGHFLSTASLNPGTVVTANPNL-VGQSPVPVQIISSTGQVM 652
            |.:...|| |.|....|:....|:::|:| ...|..|:.::.|..:::
Mouse   603 CGMGYVLP-HSLKRHQLSHQCGVSSSPSLPPAASEPPMVLLQSEPELL 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cgNP_001097306.2 COG5048 287..>371 CDD:227381 34/83 (41%)
C2H2 Zn finger 294..314 CDD:275368 10/19 (53%)
zf-H2C2_2 306..331 CDD:290200 14/24 (58%)
C2H2 Zn finger 322..342 CDD:275368 8/19 (42%)
C2H2 Zn finger 350..370 CDD:275368 5/19 (26%)
zf-H2C2_2 362..385 CDD:290200 12/22 (55%)
C2H2 Zn finger 378..398 CDD:275368 7/19 (37%)
zf-H2C2_2 390..415 CDD:290200 8/27 (30%)
C2H2 Zn finger 406..426 CDD:275368 7/19 (37%)
SIR2 <425..>465 CDD:294129 13/40 (33%)
C2H2 Zn finger 434..454 CDD:275368 7/19 (37%)
C2H2 Zn finger 461..482 CDD:275368 6/24 (25%)
C2H2 Zn finger 490..509 CDD:275368 5/18 (28%)
lambda-1 491..>603 CDD:212564 18/111 (16%)
C2H2 Zn finger 575..595 CDD:275368 6/19 (32%)
C2H2 Zn finger 720..740 CDD:275368
C2H2 Zn finger 752..771 CDD:275368
Zfp408NP_001334104.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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