DRSC/TRiP Functional Genomics Resources

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Protein Alignment cg and ZNF546

DIOPT Version :10

Sequence 1:NP_001097306.2 Gene:cg / 36571 FlyBaseID:FBgn0000289 Length:837 Species:Drosophila melanogaster
Sequence 2:NP_848639.2 Gene:ZNF546 / 339327 HGNCID:28671 Length:836 Species:Homo sapiens


Alignment Length:700 Identity:198/700 - (28%)
Similarity:287/700 - (41%) Gaps:188/700 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 GDSGLAHHHTLTNGSIVDAKTGQTVLTAGSAAAKSHFSSIGALHLTQE----------ECNE--- 183
            ||  |..|||:..|     :........|. |.:.|:      |||:.          ||.|   
Human   258 GD--LRVHHTIHAG-----ERPYECKECGK-AFRLHY------HLTEHQRIHSGVKPYECKECGK 308

  Fly   184 -------ILIKRAIAAG---------------------HHQTHTITAADGSHHHASGGTPSFCSV 220
                   :.:.:.|.||                     |.:.||            |..|..|.|
Human   309 AFSRVRDLRVHQTIHAGERPYECKECGKAFRLHYQLTEHQRIHT------------GERPYECKV 361

  Fly   221 GGATTLLGDILPGISVQVQKVIQGLEDNEDSQ-GEA--------PNLKLEPGTLELSPKTELQES 276
            .|.|.   .:...|| |.||:..|::..:.:: |:|        .:.|:..|......| |..:|
Human   362 CGKTF---RVQRHIS-QHQKIHTGVKPYKCNECGKAFSHGSYLVQHQKIHTGEKPYECK-ECGKS 421

  Fly   277 MHFSETDATIKK----ERPYSCDECGKSFLLKHHLTTHARVHTGERPHICTHCGKSFAHKHCLNT 337
            ..|....|..::    |:||.|.||||:|.|:..||.|.|.||||:|:.|..|||:|...:.|..
Human   422 FSFHAELARHRRIHTGEKPYECRECGKAFRLQTELTRHHRTHTGEKPYECKECGKAFICGYQLTL 486

  Fly   338 HLLLHSTERPYQCQECKKSFTLKHHLLTHSRVHSRERPFVCQECGRAFPLKRHLVTHSKFHAGER 402
            ||..|:.|.||:|:||.|:|:.::||..|.|:|:.|:|::|.|||:||.|:..|..|.:.|..|:
Human   487 HLRTHTGEIPYECKECGKTFSSRYHLTQHYRIHTGEKPYICNECGKAFRLQGELTRHHRIHTCEK 551

  Fly   403 PYVCEECGESFAQENHLIMHSRFHGSLNPFVCAECGASFPRKFQLVNHGRIH-GKIPHSCTVCGK 466
            ||.|:|||::|...|..|.|.|.|.|.:.::|.|||..|.|::.|..|.:|| |:.|:.|..|||
Human   552 PYECKECGKAFIHSNQFISHQRIHTSESTYICKECGKIFSRRYNLTQHFKIHTGEKPYICNECGK 616

  Fly   467 EFLQKRTLVSHMRRVHTGEQAHPCVSCGEGFLTKAELHQHVRTAHNGVNP---NTSSATIIANQQ 528
            .|..:..|..| .|:||||:.:.|..||:.|:....|.||.| .|.|..|   .....|...:..
Human   617 AFRFQTELTQH-HRIHTGEKPYKCTECGKAFIRSTHLTQHHR-IHTGEKPYECTECGKTFSRHYH 679

  Fly   529 LQQAHHHQAGQQTHPQTITVVSNPGNSTLLTVSTTDANGVARPQFVCRECGSAFNSREALALHLR 593
            |.|.|....|::                               .::|.|||:||.....|.||.|
Human   680 LTQHHRGHTGEK-------------------------------PYICNECGNAFICSYRLTLHQR 713

  Fly   594 LHTGDKSLMTDLCALTAALPGHFLSTASLNPGTVVTANPNLVGQSPVPVQIISSTGQVMSQTTLV 658
            :|||:.......|..|.:...|......|:           .|:.|...:               
Human   714 IHTGELPYECKECGKTFSRRYHLTQHFRLH-----------TGEKPYSCK--------------- 752

  Fly   659 QAANSTHPQAVVTAVPTMPVHGQQQHLQHVAQQQQQQQQQQQQQQQHVVSVAPANKPKSHFCASC 723
            :..|:...||.:|          :.|:.|..:                         |.:.|..|
Human   753 ECGNAFRLQAELT----------RHHIVHTGE-------------------------KPYKCKEC 782

  Fly   724 GKGFAAKHGLMQHNRRHPNGGCTVRTHVC-ECGKAFFQKNHLMLHQRQHL 772
            ||.|:....|.:|:|.|..    .:.:.| ||||||.:.:.|.||||.|:
Human   783 GKAFSVNSELTRHHRIHTG----EKPYQCKECGKAFIRSDQLTLHQRNHI 828

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cgNP_001097306.2 COG5048 287..>371 CDD:227381 40/87 (46%)
C2H2 Zn finger 294..314 CDD:275368 11/19 (58%)
zf-H2C2_2 306..331 CDD:463886 14/24 (58%)
C2H2 Zn finger 322..342 CDD:275368 8/19 (42%)
C2H2 Zn finger 350..370 CDD:275368 9/19 (47%)
C2H2 Zn finger 378..398 CDD:275368 9/19 (47%)
C2H2 Zn finger 406..426 CDD:275368 9/19 (47%)
C2H2 Zn finger 434..454 CDD:275368 8/19 (42%)
C2H2 Zn finger 461..482 CDD:275368 8/20 (40%)
C2H2 Zn finger 490..509 CDD:275368 7/18 (39%)
C2H2 Zn finger 575..595 CDD:275368 10/19 (53%)
C2H2 Zn finger 720..740 CDD:275368 8/19 (42%)
C2H2 Zn finger 752..771 CDD:275368 12/19 (63%)
ZNF546NP_848639.2 KRAB 60..120 CDD:214630
COG5048 <215..375 CDD:227381 30/146 (21%)
C2H2 Zn finger 219..239 CDD:275368
C2H2 Zn finger 247..267 CDD:275368 6/10 (60%)
C2H2 Zn finger 275..295 CDD:275368 6/26 (23%)
C2H2 Zn finger 303..323 CDD:275368 2/19 (11%)
C2H2 Zn finger 331..351 CDD:275368 1/19 (5%)
C2H2 Zn finger 359..379 CDD:275368 9/23 (39%)
COG5048 383..823 CDD:227381 159/538 (30%)
C2H2 Zn finger 387..407 CDD:275368 3/19 (16%)
C2H2 Zn finger 415..435 CDD:275368 5/20 (25%)
C2H2 Zn finger 443..463 CDD:275368 11/19 (58%)
C2H2 Zn finger 471..491 CDD:275368 8/19 (42%)
C2H2 Zn finger 499..519 CDD:275368 9/19 (47%)
C2H2 Zn finger 527..547 CDD:275368 9/19 (47%)
C2H2 Zn finger 555..575 CDD:275368 9/19 (47%)
C2H2 Zn finger 583..603 CDD:275368 8/19 (42%)
C2H2 Zn finger 611..631 CDD:275368 8/20 (40%)
C2H2 Zn finger 639..659 CDD:275368 8/20 (40%)
C2H2 Zn finger 667..687 CDD:275368 4/19 (21%)
C2H2 Zn finger 695..715 CDD:275368 10/19 (53%)
C2H2 Zn finger 723..743 CDD:275368 3/19 (16%)
C2H2 Zn finger 751..771 CDD:275368 5/44 (11%)
C2H2 Zn finger 779..799 CDD:275368 8/19 (42%)
C2H2 Zn finger 807..827 CDD:275368 12/19 (63%)
Blue background indicates that the domain is not in the aligned region.

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