DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cg and Paris

DIOPT Version :10

Sequence 1:NP_001097306.2 Gene:cg / 36571 FlyBaseID:FBgn0000289 Length:837 Species:Drosophila melanogaster
Sequence 2:NP_608840.1 Gene:Paris / 33657 FlyBaseID:FBgn0031610 Length:346 Species:Drosophila melanogaster


Alignment Length:471 Identity:92/471 - (19%)
Similarity:164/471 - (34%) Gaps:114/471 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   733 AALTTTTTVRPRSTFENR-ATERSFDEGAVTT------PQ---------ESQRIR-PQSRTFNVD 780
            :.|||.|||...:...:: ||..|.:..:.||      ||         ||:..| |:..:|:  
  Fly    39 STLTTVTTVTTSTGSPSKSATTSSLNVVSSTTGARPKIPQFQSVNTLSSESKMKRSPRFPSFD-- 101

  Fly   781 PNRLNQFNYNEYQGSRTSTTTTTTSTTTTTTPVPPTTFA-----------PSQANFRQRAPQQSS 834
                :|.:.:::...|..:...:.|..:.::..|.....           ...||..::..:|..
  Fly   102 ----SQSSLSDFADDRFGSIYQSRSNGSFSSDYPAAGGGVGGSATAGGGLREDANGMEQLGEQVE 162

  Fly   835 FLNPF----FSNPSTVAPAITTIPPTIVQKAVPKDRYQSIQRSGNE--GHTPSTVKKFSTLVP-- 891
            .|..:    :||....:|..:.....:       ||...::.. ||  |.......:||..:|  
  Fly   163 LLRGYVQRSYSNFDLDSPGSSAAVAAV-------DRRNELEMH-NEPPGRGLVGAAEFSAALPDF 219

  Fly   892 ------KDQYNPTTFKPNAISKKALLQFVNQKSVIGLEK--------SPFTDRVSITTSTTSTST 942
                  .:|:..|..|..........:|.:...:.|:..        :|.:....|....|::||
  Fly   220 VQDHLVMEQWYNTLPKGTGSGSSGSAEFDDVLDLTGVANVSGGGGGGAPLSSCNDIPFDLTASST 284

  Fly   943 TTTEK-APAPVTTRYPGYIPTIPPVTSTSTTTTTRAPFTTTTTVSN-APPAPNRFFQPP------ 999
            |::.: |..|.||          ||.....:...|....:.:..:| |.||...|..||      
  Fly   285 TSSSRVARDPNTT----------PVAGHRHSMGVRLDLPSRSGAANLAGPAELGFDLPPRSPTGT 339

  Fly  1000 -----VAKVSNPLTQSPI-------VVTSAKPEPTQAEIDEDDGQYHPELYE-KDFYRNRVKAKA 1051
                 :.::.:.|:..||       .||...|..:::......|.|.....: :..|:||:.|::
  Fly   340 TGDNKIHRLPDFLSDGPIHSSGRLADVTHDTPHASESSSSATMGGYRQSRRQWETQYQNRLGAES 404

  Fly  1052 ----QAAAALAQARNTNGLASLSTSDEEEIFRTAHSQNIAASGNDLILERARQAAARINEFFSSS 1112
                :....|..:|.|.|..|....:.|....|..|  :|..|          .|:...:..:||
  Fly   405 LENERLRRELEASRRTVGEQSRRIRELERDLETMVS--LARPG----------GASGSTQSNASS 457

  Fly  1113 SVKPTT---TARKEQK 1125
            .::..|   ||..|.|
  Fly   458 FLQAKTRAVTAEAEMK 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cgNP_001097306.2 COG5048 287..>371 CDD:227381
C2H2 Zn finger 294..314 CDD:275368
zf-H2C2_2 306..331 CDD:463886
C2H2 Zn finger 322..342 CDD:275368
C2H2 Zn finger 350..370 CDD:275368
C2H2 Zn finger 378..398 CDD:275368
C2H2 Zn finger 406..426 CDD:275368
C2H2 Zn finger 434..454 CDD:275368
C2H2 Zn finger 461..482 CDD:275368
C2H2 Zn finger 490..509 CDD:275368
C2H2 Zn finger 575..595 CDD:275368
C2H2 Zn finger 720..740 CDD:275368 3/6 (50%)
C2H2 Zn finger 752..771 CDD:275368 8/33 (24%)
ParisNP_608840.1 zf-AD 4..78 CDD:462262 11/38 (29%)
C2H2 Zn finger 128..148 CDD:275368 1/19 (5%)
C2H2 Zn finger 156..176 CDD:275368 4/19 (21%)
COG5048 <180..341 CDD:227381 34/178 (19%)
C2H2 Zn finger 184..204 CDD:275368 4/27 (15%)
C2H2 Zn finger 212..232 CDD:275368 4/19 (21%)
C2H2 Zn finger 240..260 CDD:275368 2/19 (11%)
C2H2 Zn finger 268..288 CDD:275368 6/19 (32%)
C2H2 Zn finger 296..316 CDD:275368 5/29 (17%)
C2H2 Zn finger 324..341 CDD:275368 5/16 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.