DRSC/TRiP Functional Genomics Resources

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Protein Alignment cg and CG2202

DIOPT Version :10

Sequence 1:NP_001097306.2 Gene:cg / 36571 FlyBaseID:FBgn0000289 Length:837 Species:Drosophila melanogaster
Sequence 2:NP_572657.2 Gene:CG2202 / 32014 FlyBaseID:FBgn0030240 Length:889 Species:Drosophila melanogaster


Alignment Length:715 Identity:161/715 - (22%)
Similarity:251/715 - (35%) Gaps:210/715 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 SFPPGTQRVITAGG------ASTVVKKQDNNQQVLSLDKNYLLVDPATAAAAAAAAGGDSGLAHH 139
            ::||..:..:.:.|      |..::.::||..:|:.        :.........::..|.|    
  Fly   252 TWPPADENTMNSDGGDELVSAEVLLNEEDNEDEVVG--------EAFQCNTNPISSNEDDG---- 304

  Fly   140 HTLTNGSIVDAKTGQTVLTAGSAAAKSHFSSIGALHLTQEECNEI----------LIKRAIAAGH 194
             ...||:      .||:.                ||:..|.|.|.          |.|:......
  Fly   305 -EEANGA------NQTLW----------------LHIKPEPCLEAEEVDLAMQLKLEKKRRRREK 346

  Fly   195 HQTHTITAADGS--HHHASGGTPSFCSVGGATTLLG--DILP-GISVQVQKVIQG---------- 244
            .:....|:.|.:  :.|.:.|...| |:.....|:|  |..| |:...::..:.|          
  Fly   347 AEAQAETSIDRTVKNEHIAIGDSQF-SIKEENQLVGSDDEAPMGVEDFMKLHVSGELPLSDEERF 410

  Fly   245 ---------LEDNEDS---------------------QGEAPNLKLEPG---------------T 264
                     |:|::|.                     .||.|..|.:.|               .
  Fly   411 DGFADDDSDLDDDDDDDDEEDAGDDDDGEFRLKQEPLDGEKPLKKAKSGRRRRRRNKDEPNPDNR 475

  Fly   265 LELSPKTELQESMHFSETDATIKKERPYSCDECGKSFLLKHHLTTHAR----------------- 312
            .|:..:| .....|......:..:::|::|..|.|:|....||..|.:                 
  Fly   476 CEVCQRT-FSRHCHLLRHKLSHLEKKPHNCPHCPKAFARSDHLKAHVQSLHSNKEHKCSLCEAAF 539

  Fly   313 ------------VHTGE------------RPHICTHCGKSFAHKHCLNTHLLLHSTERPYQCQEC 353
                        .|.||            ..|.|.:|.|.|:.|..|..|.||| |:..|.|:.|
  Fly   540 SRLDALERHKVSKHNGEGLEPGSELKLQLAEHTCEYCSKRFSSKTYLRKHTLLH-TDFLYACKTC 603

  Fly   354 KKSFTLKHHLLTHSRVHSRERPFVCQECGRAFPLKRHLVTHSKFHAGERPYVCEECGESFAQENH 418
            .::|..:..|..|.:.|:.:|.|:|..||.:|....:|..|.:.|.||:||.|..|.::|.:...
  Fly   604 DETFRERAQLREHEKTHTGQRNFLCCICGDSFARNDYLRVHMRRHNGEKPYKCRFCVKAFPRATD 668

  Fly   419 LIMHSRFHGSLNPFVCAECGASFPRKFQLVNHGRIH-GKIPHSCTVCGKEFLQKRTLVSHMRRVH 482
            |.:|.|:|....|.:|..||.||.|.:.|..|.|.| |:.|:.|..|.|.|.|...|.:|:|| |
  Fly   669 LKVHERYHTGTKPNLCNTCGKSFHRAYNLTIHMRTHTGERPYKCDQCPKSFTQSNDLKAHIRR-H 732

  Fly   483 TGEQAHPCVSCGEGFLTKAELHQHVRTAHN-GVNPNTSSATIIANQQLQQAHHHQAGQQTHPQTI 546
            |||: :.|..|...||....:..|..:||| .:...|.        :||:......|.|:|  ..
  Fly   733 TGER-YKCPHCDAYFLQLYNMRNHCMSAHNKHIETKTG--------RLQRTGLLDDGGQSH--LT 786

  Fly   547 TVVSNPGNSTLLTVSTTDANGVAR------PQFVCRECGSAFNSREALALHLRLHTGDKSLMTDL 605
            |||..|                ||      ||.......:|....|:.:....:|:         
  Fly   787 TVVMPP----------------ARYPNELDPQLAATAAATAAGGAESTSSTTVIHS--------- 826

  Fly   606 CALTAALPGHFLSTASLNPGTVVTAN--PNLVGQSPVPVQIISSTGQVMSQTTLVQAANSTHPQA 668
                   ||.:.:||:....|...||  |..| .:|.|....:....||:.....|..:|.|.|:
  Fly   827 -------PGTYNATAAAPANTFDGANFTPTAV-NTPAPFGAFNFPPAVMAHLMYNQGGSSQHSQS 883

  Fly   669  668
              Fly   884  883

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cgNP_001097306.2 COG5048 287..>371 CDD:227381 29/124 (23%)
C2H2 Zn finger 294..314 CDD:275368 7/48 (15%)
zf-H2C2_2 306..331 CDD:463886 11/65 (17%)
C2H2 Zn finger 322..342 CDD:275368 8/19 (42%)
C2H2 Zn finger 350..370 CDD:275368 5/19 (26%)
C2H2 Zn finger 378..398 CDD:275368 6/19 (32%)
C2H2 Zn finger 406..426 CDD:275368 6/19 (32%)
C2H2 Zn finger 434..454 CDD:275368 9/19 (47%)
C2H2 Zn finger 461..482 CDD:275368 9/20 (45%)
C2H2 Zn finger 490..509 CDD:275368 5/18 (28%)
C2H2 Zn finger 575..595 CDD:275368 2/19 (11%)
C2H2 Zn finger 720..740 CDD:275368
C2H2 Zn finger 752..771 CDD:275368
CG2202NP_572657.2 zf-AD 45..121 CDD:214871
C2H2 Zn finger 150..171 CDD:275368
C2H2 Zn finger 192..213 CDD:275370
C2H2 Zn finger 221..239 CDD:275370
COG5048 <443..730 CDD:227381 78/288 (27%)
C2H2 Zn finger 476..496 CDD:275368 3/20 (15%)
C2H2 Zn finger 504..525 CDD:275368 7/20 (35%)
C2H2 Zn finger 532..548 CDD:275368 0/15 (0%)
C2H2 Zn finger 573..593 CDD:275368 8/19 (42%)
C2H2 Zn finger 600..620 CDD:275368 5/19 (26%)
C2H2 Zn finger 628..648 CDD:275368 6/19 (32%)
C2H2 Zn finger 656..676 CDD:275368 6/19 (32%)
C2H2 Zn finger 684..704 CDD:275368 9/19 (47%)
C2H2 Zn finger 712..732 CDD:275368 9/20 (45%)
C2H2 Zn finger 739..755 CDD:275368 4/15 (27%)
Blue background indicates that the domain is not in the aligned region.

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