DRSC/TRiP Functional Genomics Resources

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Protein Alignment cg and Zfp169

DIOPT Version :9

Sequence 1:NP_001097306.2 Gene:cg / 36571 FlyBaseID:FBgn0000289 Length:837 Species:Drosophila melanogaster
Sequence 2:XP_006253807.1 Gene:Zfp169 / 306816 RGDID:1304631 Length:730 Species:Rattus norvegicus


Alignment Length:620 Identity:184/620 - (29%)
Similarity:248/620 - (40%) Gaps:182/620 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   241 VIQGLEDNEDS---QGEAPNLKLEPGTLELSPK------------TELQESMHFSETDATIKKER 290
            |::|.:::...   ||..| |.|...|...||:            .:..:.|.....|.   .|:
  Rat   194 VLKGPDESASGAVIQGAFP-LGLNDVTNLFSPQKHHVYPDCGGGFCQSSDLMKLQRMDG---GEK 254

  Fly   291 PYSCDECGKSFLLKHHLTTHARVHTGERPHICTHCGKSFAHKHCLNTH-LLLHSTERPYQCQECK 354
            ||||.|||..|..|..||.|.|.|:||:||:|..||:.|.:...||:| .::||.|||..|.||.
  Rat   255 PYSCSECGHQFTQKASLTVHQRKHSGEKPHVCGECGRGFMYVSSLNSHKKIIHSGERPLVCPECG 319

  Fly   355 KSFTLKHHLLTHSRVHSRERPFVCQECGRAF----PLKRH------------------------L 391
            :.|..|..||.|.|.|..::||||.||||.|    .|.:|                        |
  Rat   320 RGFRQKIDLLLHQRTHLDKKPFVCPECGRGFCRKASLLQHRWSHSGDNPFICSVCGRGFRLLSRL 384

  Fly   392 VTHSKFHAGERPYVCEECGESFAQENHLIMHSRFHGSLNPFVCAECGASFPRKFQLVNHGRIHGK 456
            :||...|:||:|:||.:||:.|.|:..|:.|.:.|....|:||.:||.||.:|..|:.|.|||.:
  Rat   385 LTHQITHSGEKPHVCPDCGQRFGQKGTLMRHQKTHTGEKPYVCRQCGWSFTQKVNLIRHQRIHTE 449

  Fly   457 I-PHSCTVCGKEFLQKRTLVSHMRRVHTGEQAHPCVSCGEGFLTKAELHQHVRTAHNGVNP---- 516
            : |..|..||:.|..|..|..| |:.||||:.:.|..||.||..|..|..|.| .|.|..|    
  Rat   450 VKPFLCPECGRAFEFKSLLTRH-RKTHTGEKPYVCPQCGRGFSQKFNLIGHQR-IHAGELPFLCP 512

  Fly   517 -----NTSSATIIANQQLQQAHHHQAGQQTHPQTITVVSNPGNSTLLTVSTTDANGVARPQFVCR 576
                 ....||:|.:            |:||.                       |..:| :.|.
  Rat   513 ECGRAFVKKATLIRH------------QRTHA-----------------------GWEKP-YQCP 541

  Fly   577 ECGSAFNSREALALHLRLHTGDKSLMTDLCALTAALPGHFLSTASLNPGTVVTANPNLVGQSPVP 641
            |||..|..:..|..|.::|||:|..:...|                  |...:...||:|.    
  Rat   542 ECGRTFEFKSLLTRHQKIHTGEKPYVCPQC------------------GRGFSQKFNLIGH---- 584

  Fly   642 VQIISSTGQVMSQTTLVQAANSTHPQAVVTAVPTMPVHGQQQHLQHVAQQQQQQQQQQQQQQQHV 706
                                ..||......|.|            ...|:.:|:....:.|:.|.
  Rat   585 --------------------QKTHTGEKPYACP------------QCGQRFRQKFNLVRHQRIHT 617

  Fly   707 VSVAPANKPKSHFCASCGKGFAAKHGLMQHNRRH--------PNGGCTV----------RTH--- 750
                 ..||  ..||.||:.|..|..|::|.|.|        |..|...          :||   
  Rat   618 -----GEKP--FLCAECGRAFGKKVSLIRHQRTHGEEKPYKCPECGRAFEFKSLFIRHQKTHTGE 675

  Fly   751 ---VC-ECGKAFFQKNHLMLHQRQHLETKPAISQQ 781
               || ||||||.||.:|:.|||.|...||.:..|
  Rat   676 KPYVCTECGKAFSQKFNLIGHQRSHTGEKPYLCSQ 710

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cgNP_001097306.2 COG5048 287..>371 CDD:227381 40/84 (48%)
C2H2 Zn finger 294..314 CDD:275368 10/19 (53%)
zf-H2C2_2 306..331 CDD:290200 13/24 (54%)
C2H2 Zn finger 322..342 CDD:275368 7/20 (35%)
C2H2 Zn finger 350..370 CDD:275368 9/19 (47%)
zf-H2C2_2 362..385 CDD:290200 13/22 (59%)
C2H2 Zn finger 378..398 CDD:275368 11/47 (23%)
zf-H2C2_2 390..415 CDD:290200 13/48 (27%)
C2H2 Zn finger 406..426 CDD:275368 7/19 (37%)
SIR2 <425..>465 CDD:294129 16/40 (40%)
C2H2 Zn finger 434..454 CDD:275368 9/19 (47%)
C2H2 Zn finger 461..482 CDD:275368 8/20 (40%)
C2H2 Zn finger 490..509 CDD:275368 8/18 (44%)
lambda-1 491..>603 CDD:212564 30/120 (25%)
C2H2 Zn finger 575..595 CDD:275368 7/19 (37%)
C2H2 Zn finger 720..740 CDD:275368 9/19 (47%)
C2H2 Zn finger 752..771 CDD:275368 13/19 (68%)
Zfp169XP_006253807.1 KRAB 14..73 CDD:214630
KRAB 14..53 CDD:279668
C2H2 Zn finger 231..250 CDD:275368 1/18 (6%)
COG5048 254..725 CDD:227381 171/556 (31%)
C2H2 Zn finger 258..278 CDD:275368 10/19 (53%)
zf-H2C2_2 270..293 CDD:290200 12/22 (55%)
C2H2 Zn finger 286..307 CDD:275368 7/20 (35%)
C2H2 Zn finger 315..335 CDD:275368 9/19 (47%)
C2H2 Zn finger 343..363 CDD:275368 8/19 (42%)
C2H2 Zn finger 371..391 CDD:275368 3/19 (16%)
zf-H2C2_2 384..406 CDD:290200 11/21 (52%)
C2H2 Zn finger 399..419 CDD:275368 7/19 (37%)
zf-H2C2_2 412..436 CDD:290200 10/23 (43%)
C2H2 Zn finger 427..447 CDD:275368 9/19 (47%)
zf-H2C2_2 439..463 CDD:290200 9/23 (39%)
C2H2 Zn finger 455..475 CDD:275368 8/20 (40%)
zf-H2C2_2 468..492 CDD:290200 12/24 (50%)
C2H2 Zn finger 483..503 CDD:275368 9/20 (45%)
C2H2 Zn finger 511..531 CDD:275368 4/31 (13%)
zf-C2H2 538..560 CDD:278523 7/21 (33%)
C2H2 Zn finger 540..560 CDD:275368 7/19 (37%)
zf-H2C2_2 553..577 CDD:290200 8/41 (20%)
C2H2 Zn finger 568..588 CDD:275368 5/61 (8%)
zf-H2C2_2 584..605 CDD:290200 5/56 (9%)
C2H2 Zn finger 596..616 CDD:275368 4/31 (13%)
zf-H2C2_2 608..631 CDD:290200 8/29 (28%)
C2H2 Zn finger 624..644 CDD:275368 9/19 (47%)
zf-H2C2_2 636..660 CDD:290200 6/23 (26%)
C2H2 Zn finger 652..672 CDD:275368 2/19 (11%)
zf-H2C2_2 667..689 CDD:290200 10/21 (48%)
C2H2 Zn finger 680..700 CDD:275368 13/19 (68%)
zf-H2C2_2 696..715 CDD:290200 7/15 (47%)
C2H2 Zn finger 708..728 CDD:275368 1/3 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
21.870

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