DRSC/TRiP Functional Genomics Resources

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Protein Alignment cg and Fezf2

DIOPT Version :10

Sequence 1:NP_001097306.2 Gene:cg / 36571 FlyBaseID:FBgn0000289 Length:837 Species:Drosophila melanogaster
Sequence 2:NP_001100721.1 Gene:Fezf2 / 305719 RGDID:1311068 Length:455 Species:Rattus norvegicus


Alignment Length:229 Identity:77/229 - (33%)
Similarity:111/229 - (48%) Gaps:25/229 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 QGLEDNE----DSQGEAPNLKLEPGTLELSPKTELQESMHFSETDATIKKERPYSCDECGKSFLL 303
            |.|::|.    :..|...:.||..|:.:..||.                    ::|:.|||.|..
  Rat   239 QVLKENSALTAERGGVKSHSKLPGGSTDSKPKN--------------------FTCEVCGKVFNA 283

  Fly   304 KHHLTTHARVHTGERPHICTHCGKSFAHKHCLNTHLLLHSTERPYQCQECKKSFTLKHHLLTHSR 368
            .::||.|..||||.||.:|..|||.|.....|..|.::|:.|:|::|.:|.|:|.....|.||.|
  Rat   284 HYNLTRHMPVHTGARPFVCKVCGKGFRQASTLCRHKIIHTQEKPHKCNQCGKAFNRSSTLNTHIR 348

  Fly   369 VHSRERPFVCQECGRAFPLKRHLVTHSKFHAGERPYVCEECGESFAQENHLIMHSRFHGSLNPFV 433
            :|:..:||||:.||:.|..|.:...|...|:||:.|.|..|.::|.|..:|..|...|....||.
  Rat   349 IHAGYKPFVCEFCGKGFHQKGNYKNHKLTHSGEKQYKCTICNKAFHQVYNLTFHMHTHNDKKPFT 413

  Fly   434 CAECGASFPRKFQLVNHGR-IHGKIPHSCTVCGK 466
            ||.||..|.|.|.|..|.| :|..:..:.|...|
  Rat   414 CATCGKGFCRNFDLKKHVRKLHDSVGPTATPSAK 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cgNP_001097306.2 COG5048 287..>371 CDD:227381 32/83 (39%)
C2H2 Zn finger 294..314 CDD:275368 8/19 (42%)
zf-H2C2_2 306..331 CDD:463886 14/24 (58%)
C2H2 Zn finger 322..342 CDD:275368 7/19 (37%)
C2H2 Zn finger 350..370 CDD:275368 8/19 (42%)
C2H2 Zn finger 378..398 CDD:275368 6/19 (32%)
C2H2 Zn finger 406..426 CDD:275368 6/19 (32%)
C2H2 Zn finger 434..454 CDD:275368 10/20 (50%)
C2H2 Zn finger 461..482 CDD:275368 2/6 (33%)
C2H2 Zn finger 490..509 CDD:275368
C2H2 Zn finger 575..595 CDD:275368
C2H2 Zn finger 720..740 CDD:275368
C2H2 Zn finger 752..771 CDD:275368
Fezf2NP_001100721.1 C2H2 Zn finger 274..294 CDD:275368 8/19 (42%)
COG5048 <284..>390 CDD:227381 42/105 (40%)
C2H2 Zn finger 302..322 CDD:275368 7/19 (37%)
zf-H2C2_2 317..339 CDD:463886 8/21 (38%)
C2H2 Zn finger 330..350 CDD:275368 8/19 (42%)
C2H2 Zn finger 358..378 CDD:275368 6/19 (32%)
SFP1 <380..436 CDD:227516 22/55 (40%)
C2H2 Zn finger 386..406 CDD:275368 6/19 (32%)
C2H2 Zn finger 414..432 CDD:275368 9/17 (53%)
Blue background indicates that the domain is not in the aligned region.

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