DRSC/TRiP Functional Genomics Resources

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Protein Alignment cg and drl

DIOPT Version :10

Sequence 1:NP_001097306.2 Gene:cg / 36571 FlyBaseID:FBgn0000289 Length:837 Species:Drosophila melanogaster
Sequence 2:NP_571052.2 Gene:drl / 30167 ZFINID:ZDB-GENE-991213-3 Length:411 Species:Danio rerio


Alignment Length:494 Identity:132/494 - (26%)
Similarity:197/494 - (39%) Gaps:129/494 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   287 KKERPYSCDECGKSFLLKHHLTTHARVHTGERPHICTHCGKSFAHKHCLNTHLLLHSTERPYQCQ 351
            |.::..:|..|.|.|..|.||..|.||||||:|:.|..|||.|.:|..|..||.:|:...||.|.
Zfish    31 KAKKSVACSHCKKRFSHKAHLQIHMRVHTGEKPYRCDQCGKCFPYKQSLKLHLDIHAKGNPYTCD 95

  Fly   352 ECKKSFTLKHHLLTHSRVHSRERPFVCQECGRAFPLKRHLVTHSKFHAGERPYVCEECGESFAQE 416
            ||.:||..:..|.:|..:|.:.:|:.|.:|.:::..:.||..|.|.|.||:|:.||.||:||...
Zfish    96 ECGESFKTRLQLRSHMTLHPKYKPYKCDQCEKSYGREDHLQRHMKLHTGEKPHKCEHCGKSFPMR 160

  Fly   417 NHLIMHSRFHGSLNPFVCAECGASFPRKFQLVNHGRIH-GKIPHSCTVCGKEFLQKRTLVSHMRR 480
            :.|..|...|..:.|:.|.:||..|..|.....|..|| |:.|::|..|||.|..:::|..|| |
Zfish   161 DLLRSHLMVHSEVKPYTCDQCGKGFTLKKSYNEHMNIHTGERPYTCDQCGKGFPYEQSLNLHM-R 224

  Fly   481 VHTGEQAHPCVSCGEGFLTKAELHQHVRTAHNGVNPNTSSATIIANQQLQQAHHHQAGQQTHPQT 545
            .|..|:...|..||:.|..|...:.|:: .|.|..|                             
Zfish   225 FHREEKPFTCDQCGQSFSQKGAYNIHMK-IHTGEKP----------------------------- 259

  Fly   546 ITVVSNPGNSTLLTVSTTDANGVARPQFVCRECGSAFNSREALALHLRLHTGDKSLMTDLCALTA 610
                                       :.|.:||.:|....:|.||:..|||:|....|.|    
Zfish   260 ---------------------------YTCDQCGMSFRHGYSLKLHMTHHTGEKPFHCDQC---- 293

  Fly   611 ALPGHFLSTASLNPGTVVTANPNLVGQSPVPVQIIS--STGQVMSQTTLVQAANSTHPQAVVTAV 673
               ....|||......:.|.:         ..||.|  :.|:..:|                   
Zfish   294 ---DKCYSTALFLKNHIKTHD---------KAQIYSCLTCGKTFNQ------------------- 327

  Fly   674 PTMPVHGQQQHLQHVAQQQQQQQQQQQQQQQHVVSVAPANKPKSHFCASCGKGFAAKHGLMQHNR 738
                :.|.:.|                 :::|.::       |...|..|||.:.....|.||..
Zfish   328 ----LRGLRLH-----------------EKRHSLT-------KPFMCFDCGKCYFTDTELKQHLP 364

  Fly   739 RHPNGGCTVRTHVCE-CGKAFFQKNHLMLHQRQHLETKP 776
            .|.|    .|.::|. |.|:|.:...|::|::.|...||
Zfish   365 VHSN----ERPYMCSLCFKSFPRMGSLIVHEKTHNGEKP 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cgNP_001097306.2 COG5048 287..>371 CDD:227381 35/83 (42%)
C2H2 Zn finger 294..314 CDD:275368 9/19 (47%)
zf-H2C2_2 306..331 CDD:463886 15/24 (63%)
C2H2 Zn finger 322..342 CDD:275368 9/19 (47%)
C2H2 Zn finger 350..370 CDD:275368 7/19 (37%)
C2H2 Zn finger 378..398 CDD:275368 6/19 (32%)
C2H2 Zn finger 406..426 CDD:275368 8/19 (42%)
C2H2 Zn finger 434..454 CDD:275368 6/19 (32%)
C2H2 Zn finger 461..482 CDD:275368 9/20 (45%)
C2H2 Zn finger 490..509 CDD:275368 6/18 (33%)
C2H2 Zn finger 575..595 CDD:275368 7/19 (37%)
C2H2 Zn finger 720..740 CDD:275368 7/19 (37%)
C2H2 Zn finger 752..771 CDD:275368 6/19 (32%)
drlNP_571052.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33 1/1 (100%)
C2H2 Zn finger 38..58 CDD:275368 9/19 (47%)
COG5048 62..408 CDD:227381 117/463 (25%)
C2H2 Zn finger 66..86 CDD:275368 9/19 (47%)
C2H2 Zn finger 94..114 CDD:275368 7/19 (37%)
C2H2 Zn finger 122..142 CDD:275368 6/19 (32%)
C2H2 Zn finger 150..170 CDD:275368 8/19 (42%)
C2H2 Zn finger 178..198 CDD:275368 6/19 (32%)
C2H2 Zn finger 206..226 CDD:275368 9/20 (45%)
C2H2 Zn finger 234..254 CDD:275368 6/20 (30%)
C2H2 Zn finger 262..282 CDD:275368 7/19 (37%)
C2H2 Zn finger 290..310 CDD:275368 5/26 (19%)
C2H2 Zn finger 318..338 CDD:275368 4/59 (7%)
C2H2 Zn finger 346..366 CDD:275368 7/19 (37%)
C2H2 Zn finger 374..394 CDD:275368 6/19 (32%)

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