DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cg and znf-782

DIOPT Version :9

Sequence 1:NP_001097306.2 Gene:cg / 36571 FlyBaseID:FBgn0000289 Length:837 Species:Drosophila melanogaster
Sequence 2:NP_500033.1 Gene:znf-782 / 190310 WormBaseID:WBGene00021931 Length:662 Species:Caenorhabditis elegans


Alignment Length:601 Identity:146/601 - (24%)
Similarity:215/601 - (35%) Gaps:213/601 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 QEECNEIL--------IKRAIAAGHHQTHTITAADGSHHHASGGTPSFCSVGGATTLLGDILPGI 234
            :||.:|.|        ....::||  ..|..::::|||    |.:|                   
 Worm    40 EEEFDEELEELENSDSASSLVSAG--SPHGSSSSNGSH----GSSP------------------- 79

  Fly   235 SVQVQKVIQGLEDNEDSQGEAPNLKL----EPGTLELSPKTELQESMHFSETDATIKKERPYSCD 295
            .:|||...||...:....|:.....:    ..|....|    :.||...|.|.     |:||:|.
 Worm    80 PLQVQSPSQGSGSSGSPTGQPEKRHICTVCGKGFSYFS----ILESHKRSHTG-----EKPYNCH 135

  Fly   296 ECGKSFLLKHHLTTHARVHTGERPHICTHCGKSFA-------HK--------------------- 332
            .|.|:|..|..|..|.|.||||||:.|.:|.|:||       |:                     
 Worm   136 FCQKTFAQKATLQVHERTHTGERPYKCRYCEKTFAQYGTKTVHEKSAHLGIRNYKCPKCDKLLSS 200

  Fly   333 -HCLNTHLLLHSTERPYQCQECKKSFTLKHHLLTH-SRVHSR-ERPFVCQECGRAFPLKRHLVTH 394
             ..|.||...|. ::.::|..|.|:|.||::|..| .:||.: ||..||..|.:.|.....|..|
 Worm   201 PSALYTHKKTHG-DKTFRCDFCPKTFALKNYLKLHVKQVHEQNERKHVCVYCNKGFAYAGSLQVH 264

  Fly   395 SKFHAGERPYVCEECGESFAQENHLIMHSRFHGSLNPFVCAECGASFPRKFQLVNHGRIHGKIPH 459
            .:.|.|||||||:.|.::||.:.:|..|.|.|....|:.|..|..:|.:|.||..|...|....|
 Worm   265 VRTHTGERPYVCKFCPKAFASQGNLQSHERTHTGERPYSCQFCQRTFIQKSQLTAHESTHLTQKH 329

  Fly   460 S---------------------------CTVCGKEFLQKRTLVSHMRRVHTGEQAHPCVSCGEGF 497
            |                           ||.|.|::....:|..|||: ||.:.|:.|..||:.:
 Worm   330 SVNPDSTTADILPVAGSVTDHQMVGNYECTFCNKKYPYASSLYIHMRK-HTEKSAYSCDGCGKPY 393

  Fly   498 LTKAELHQHVRTAHNGVNPNTSSATIIANQQLQQAHHHQAGQQTHPQTITVVSNPGNSTLLTVST 562
            ..|..|:.|                    |...:|..::                       :.|
 Worm   394 SQKISLNIH--------------------QDQCEAFKNR-----------------------LKT 415

  Fly   563 TDANGVARPQFV--CRECGSAFNSREALALH------------LRL-------HTGDKSLMTD-- 604
            ||:      ||.  |..||.:|..|.||.:|            |:|       ...|....|:  
 Worm   416 TDS------QFSHNCDGCGKSFVQRIALQIHVDSCEPHKNLARLKLSQQQNQNQNSDSESDTEMK 474

  Fly   605 LCALTAALPGHFLSTASLNPGTVVTANP---------NLVGQSPVPVQIISSTGQVMSQTTLVQA 660
            :|.|               |...:|..|         |:..|.|.|    :..|.::..|:|.  
 Worm   475 ICPL---------------PNPPLTLAPTHQQIPPPVNIYAQQPPP----NPLGSILGNTSLT-- 518

  Fly   661 ANSTHPQAVVTAVPTM 676
                 ||.:...:|::
 Worm   519 -----PQTLNFGLPSL 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cgNP_001097306.2 COG5048 287..>371 CDD:227381 36/113 (32%)
C2H2 Zn finger 294..314 CDD:275368 8/19 (42%)
zf-H2C2_2 306..331 CDD:290200 14/31 (45%)
C2H2 Zn finger 322..342 CDD:275368 9/48 (19%)
C2H2 Zn finger 350..370 CDD:275368 8/20 (40%)
zf-H2C2_2 362..385 CDD:290200 9/24 (38%)
C2H2 Zn finger 378..398 CDD:275368 5/19 (26%)
zf-H2C2_2 390..415 CDD:290200 12/24 (50%)
C2H2 Zn finger 406..426 CDD:275368 7/19 (37%)
SIR2 <425..>465 CDD:294129 14/66 (21%)
C2H2 Zn finger 434..454 CDD:275368 7/19 (37%)
C2H2 Zn finger 461..482 CDD:275368 8/20 (40%)
C2H2 Zn finger 490..509 CDD:275368 6/18 (33%)
lambda-1 491..>603 CDD:212564 23/132 (17%)
C2H2 Zn finger 575..595 CDD:275368 10/38 (26%)
C2H2 Zn finger 720..740 CDD:275368
C2H2 Zn finger 752..771 CDD:275368
znf-782NP_500033.1 C2H2 Zn finger 106..126 CDD:275368 4/23 (17%)
zf-H2C2_2 119..143 CDD:290200 11/28 (39%)
C2H2 Zn finger 134..154 CDD:275368 8/19 (42%)
zf-H2C2_2 147..171 CDD:290200 13/23 (57%)
C2H2 Zn finger 162..180 CDD:275368 6/17 (35%)
COG5048 <187..404 CDD:227381 65/238 (27%)
C2H2 Zn finger 191..211 CDD:275370 3/19 (16%)
C2H2 Zn finger 218..239 CDD:275368 8/20 (40%)
C2H2 Zn finger 248..268 CDD:275368 5/19 (26%)
zf-H2C2_2 260..285 CDD:290200 12/24 (50%)
C2H2 Zn finger 276..296 CDD:275368 7/19 (37%)
zf-H2C2_2 288..313 CDD:290200 8/24 (33%)
C2H2 Zn finger 304..324 CDD:275368 7/19 (37%)
C2H2 Zn finger 386..403 CDD:275368 6/36 (17%)
C2H2 Zn finger 424..441 CDD:275368 7/16 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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