DRSC/TRiP Functional Genomics Resources

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Protein Alignment cg and Y5F2A.4

DIOPT Version :9

Sequence 1:NP_001097306.2 Gene:cg / 36571 FlyBaseID:FBgn0000289 Length:837 Species:Drosophila melanogaster
Sequence 2:NP_502063.1 Gene:Y5F2A.4 / 178004 WormBaseID:WBGene00012385 Length:454 Species:Caenorhabditis elegans


Alignment Length:305 Identity:82/305 - (26%)
Similarity:122/305 - (40%) Gaps:86/305 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   292 YSCDECGKSFLLKHHLTTH-ARVH----------TGERPHICTHCGKSFAHKHCLNTHLLLHSTE 345
            :.|.:|||:|.||.:||.| .|:|          :...|..|:.|.|.|.....|..|.:.|...
 Worm     4 HKCQDCGKTFDLKRYLTKHELRMHKNVVKSKNDRSASDPLKCSMCDKVFPRLSHLQRHQMTHLNV 68

  Fly   346 RPYQCQECKKSFTLKHHLLTH-SRVHSRERPFV------CQECGRAF----PLKRHLVTHSKFHA 399
            |.|.|..|::.|..|.||..| ||.|| ..|.|      |.:||:.|    .::.|..|:.:.|.
 Worm    69 RNYSCTFCEEKFVQKSHLTRHVSRKHS-NAPGVEVDWTACDKCGQLFKTTYEMRIHRQTYHELHK 132

  Fly   400 GERPYVCEEC------GESFAQENHLIMHSRFHGSLNPFVCAECGASFPRKFQLVNHGRIHGKIP 458
                  |::|      |....:::|  |..|.:.:    ||.||||||.|...||:|.       
 Worm   133 ------CKQCQEVIEAGSDGLRKHH--MQCRKYSN----VCDECGASFSRPADLVSHE------- 178

  Fly   459 HSCTVCGKEFLQKRTLVSHMRRVHTGEQAHPCVSCGEGFLTKAELHQHVRTAHNGVNP-NTSSAT 522
               |.|.|:|                  |..|..|...|..:.:|.:|::.||  .:| ..|...
 Worm   179 ---TSCLKKF------------------AFVCKPCDSYFRQRVQLDRHIKKAH--FHPTKCSKCE 220

  Fly   523 IIANQQLQQAHHHQAGQQTHPQTITVV-------SNPGNSTLLTV 560
            .|::..:|.:.|..       :.:.|:       .||..:.:.||
 Worm   221 QISDTPVQNSRHSL-------ECVKVIICGYCSLKNPDKNHVATV 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cgNP_001097306.2 COG5048 287..>371 CDD:227381 31/90 (34%)
C2H2 Zn finger 294..314 CDD:275368 11/20 (55%)
zf-H2C2_2 306..331 CDD:290200 10/35 (29%)
C2H2 Zn finger 322..342 CDD:275368 6/19 (32%)
C2H2 Zn finger 350..370 CDD:275368 9/20 (45%)
zf-H2C2_2 362..385 CDD:290200 12/29 (41%)
C2H2 Zn finger 378..398 CDD:275368 6/23 (26%)
zf-H2C2_2 390..415 CDD:290200 6/30 (20%)
C2H2 Zn finger 406..426 CDD:275368 6/25 (24%)
SIR2 <425..>465 CDD:294129 13/39 (33%)
C2H2 Zn finger 434..454 CDD:275368 11/19 (58%)
C2H2 Zn finger 461..482 CDD:275368 4/20 (20%)
C2H2 Zn finger 490..509 CDD:275368 5/18 (28%)
lambda-1 491..>603 CDD:212564 16/78 (21%)
C2H2 Zn finger 575..595 CDD:275368
C2H2 Zn finger 720..740 CDD:275368
C2H2 Zn finger 752..771 CDD:275368
Y5F2A.4NP_502063.1 C2H2 Zn finger 6..27 CDD:275368 11/20 (55%)
zf-C2H2 44..65 CDD:278523 6/20 (30%)
C2H2 Zn finger 45..65 CDD:275368 6/19 (32%)
C2H2 Zn finger 73..94 CDD:275368 9/20 (45%)
C2H2 Zn finger 107..126 CDD:275368 5/18 (28%)
C2H2 Zn finger 161..181 CDD:275368 12/29 (41%)
C2H2 Zn finger 189..212 CDD:275368 7/24 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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