DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cg and cg

DIOPT Version :10

Sequence 1:NP_001097306.2 Gene:cg / 36571 FlyBaseID:FBgn0000289 Length:837 Species:Drosophila melanogaster
Sequence 2:XP_061518643.1 Gene:cg / 1271191 VectorBaseID:AGAMI1_013451 Length:931 Species:Anopheles gambiae


Alignment Length:939 Identity:489/939 - (52%)
Similarity:572/939 - (60%) Gaps:177/939 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MCAAQN--PPPFGYTWGFADNGNRAAESVLEISPNINYTVSG--ESMPYLLSTDGSLAVQKDVKG 61
            |||||.  |..|.|||||.:|..  .:||:||||||||||..  .:||||...||:..:.||.||
Mosquito     1 MCAAQTNAPASFNYTWGFTENPR--PDSVVEISPNINYTVGDGTTTMPYLQLPDGASILLKDGKG 63

  Fly    62 LT--AGGKNNVVRRMFVVNDPS-FPPGTQRVITAGGASTVVKKQDNNQQVLSLDKNYLLVDPATA 123
            ..  ||||:  ||||.||||.| .|.||||:||.||.:|.|        .....|.:.:::.:..
Mosquito    64 SISHAGGKS--VRRMIVVNDASALPQGTQRIITTGGTATAV--------ATGHQKKHEVINQSNT 118

  Fly   124 AAAAAAAGGDSGLAHHHTLTNGSIVDAKTGQTVLTAGSAAAKSHFSSIGALHLTQEECNEILIKR 188
            .                ||.|| ::|.||...:.|:|::|   ..|.||.:.||.||||:||:||
Mosquito   119 T----------------TLANG-LIDTKTKAILTTSGASA---FMSPIGPIQLTAEECNDILMKR 163

  Fly   189 AIA--AGHHQTHTITAADGSHHHASGGTPSFCSVGGATTLLGDILPGISVQVQKVIQGLEDNEDS 251
            |.|  |.::|...|...||.|                        ..|||||||||||||:.:||
Mosquito   164 AAAAVAANNQHAPINNNDGQH------------------------TSISVQVQKVIQGLEEGDDS 204

  Fly   252 QGEAPN--LKLEPGTLELSPKTELQESMHFSE---------TDATIKKERPYSCDECGKSFLLKH 305
            |....|  :|:|| ||.:|||.|..| |.::|         |...:.||||||||:|||||||||
Mosquito   205 QATTSNHQMKIEP-TLSISPKLEAVE-MDYNEYVQQEATTPTPNVVPKERPYSCDQCGKSFLLKH 267

  Fly   306 HLTTHARVHTG--ERPHICTHCGKSFAHKHCLNTHLLLHSTERPYQCQECKKSFTLKHHLLTHSR 368
            |||||||||||  ||||:|.||||.||||||||||||||||||||||||||||||||||||||||
Mosquito   268 HLTTHARVHTGERERPHVCVHCGKDFAHKHCLNTHLLLHSTERPYQCQECKKSFTLKHHLLTHSR 332

  Fly   369 VHSRERPFVCQECGRAFPLKRHLVTHSKFHAGERPYVCEECGESFAQENHLIMHSRFHGSLNPFV 433
            ||||||||||.:|||:||||||||||||||||||||||.:|||||||:.||:||||||||:|||.
Mosquito   333 VHSRERPFVCDQCGRSFPLKRHLVTHSKFHAGERPYVCADCGESFAQDEHLVMHSRFHGSVNPFH 397

  Fly   434 CAECGASFPRKFQLVNHGRIHGKIPHSCTVCGKEFLQKRTLVSHMRRVHTGEQAHPCVSCGEGFL 498
            |.:|||:|||||||||||:|||::|||||:|||||||||||.:|| |:|||:|..||::|||||.
Mosquito   398 CRDCGATFPRKFQLVNHGKIHGRVPHSCTLCGKEFLQKRTLAAHM-RIHTGDQPFPCIACGEGFR 461

  Fly   499 TKAELHQHVRTAHNGVNPNTSSATII---------ANQQLQQAHHHQA---GQQTHPQT-ITV-- 548
            ||:||:.|.|..|:|||||.|:.|||         |.||.||....||   .||.|.|. |.|  
Mosquito   462 TKSELNAHNRHTHSGVNPNASNTTIITTNTVVTSNAQQQAQQQAQQQAQVQSQQPHQQQHIEVKQ 526

  Fly   549 ---------VSNPGNSTLLTVSTTDANG----VARPQFVCRECGSAFNSREALALHLRLHTGDKS 600
                     |.:..|..::|.......|    ..:|||.||||||||||||||||||||||||||
Mosquito   527 IQHYQGQQQVQDVSNGNIITTIAATGQGSPENAGKPQFACRECGSAFNSREALALHLRLHTGDKS 591

  Fly   601 LMTDLCALTAALPGHFLSTAS---------------LNPG--TVVTANPNLVGQSPVPVQIISST 648
            |||||||||||||||.....:               :|.|  .::..|..::..|..|||||:|:
Mosquito   592 LMTDLCALTAALPGHLFPAVNQDMKVEEYHPMVETVVNGGDSAIMATNNPIIQNSSFPVQIITSS 656

  Fly   649 GQVMSQTTLVQAANSTHPQAV---------VTAVPTMPVHGQQQHLQHVAQQQQQQQQQQQQQQQ 704
            |||:.|.. .|:....|.|.:         .|.|.......|||.:||..|||.||||.||||| 
Mosquito   657 GQVVQQIQ-PQSPPQQHQQQLQQAQVVQQHQTVVQQQQQQNQQQQIQHQQQQQHQQQQHQQQQQ- 719

  Fly   705 HVVSVAPANKPKSHFCASCGKGFAAKHGLMQHNRRHPNGGCTVRTHVCECGKAFFQKNHLMLHQR 769
                    .|||||:|..|||||||||||:.||||||||||||||||||||||||||||||||||
Mosquito   720 --------TKPKSHYCTHCGKGFAAKHGLLLHNRRHPNGGCTVRTHVCECGKAFFQKNHLMLHQR 776

  Fly   770 QHLETKP----------AISQQQEAATQQQL----------------------ATAGEQQQVQVQ 802
            ||||...          |..|||.:|.||||                      |.|.:|||.|..
Mosquito   777 QHLEQNQRSGGGGAAGGAGGQQQASAGQQQLVVIQQPNQDSLVQQQQQQQQAAAAAAQQQQAQQA 841

  Fly   803 IMPDGQIHGKVIKYEICRNVMPEDQQQEQ 831
            .....|...::.:.:..:..:...|||:|
Mosquito   842 AAAAAQQQHQLQQQQAQQQAVAVQQQQQQ 870

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cgNP_001097306.2 COG5048 287..>371 CDD:227381 78/85 (92%)
C2H2 Zn finger 294..314 CDD:275368 18/19 (95%)
zf-H2C2_2 306..331 CDD:463886 21/26 (81%)
C2H2 Zn finger 322..342 CDD:275368 17/19 (89%)
C2H2 Zn finger 350..370 CDD:275368 19/19 (100%)
C2H2 Zn finger 378..398 CDD:275368 16/19 (84%)
C2H2 Zn finger 406..426 CDD:275368 14/19 (74%)
C2H2 Zn finger 434..454 CDD:275368 15/19 (79%)
C2H2 Zn finger 461..482 CDD:275368 16/20 (80%)
C2H2 Zn finger 490..509 CDD:275368 11/18 (61%)
C2H2 Zn finger 575..595 CDD:275368 19/19 (100%)
C2H2 Zn finger 720..740 CDD:275368 15/19 (79%)
C2H2 Zn finger 752..771 CDD:275368 18/18 (100%)
cgXP_061518643.1 None

Return to query results.
Submit another query.