DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cg and si:ch1073-127d16.1

DIOPT Version :9

Sequence 1:NP_001097306.2 Gene:cg / 36571 FlyBaseID:FBgn0000289 Length:837 Species:Drosophila melanogaster
Sequence 2:XP_021323944.1 Gene:si:ch1073-127d16.1 / 101883863 ZFINID:ZDB-GENE-120214-30 Length:454 Species:Danio rerio


Alignment Length:569 Identity:167/569 - (29%)
Similarity:243/569 - (42%) Gaps:165/569 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   246 ED--NEDSQG-----EAPNLKLEPGTLELSPKTELQ-ESMHFSETDA----------TIKK---- 288
            ||  :.|||.     |.|:||::.|.: .:|...|: ..::.||...          |:|:    
Zfish     8 EDCVSHDSQSGPYFTEQPSLKIQTGDI-FTPIQSLESHKVNHSEKQTFICAECGKSFTLKRYLKN 71

  Fly   289 -------ERPYSCDECGKSFLLKHHLTTHARVHTGERPHICTHCGKSFAHKHCLNTHLLLHSTER 346
                   ..|::|.||.|.|.:||.|.||.::||||:|..|..|||.|..|..|:.||.:|:.|:
Zfish    72 HMKIHTGAHPFTCPECDKCFTMKHSLETHLKIHTGEKPFTCPDCGKKFRLKQSLDGHLRIHTGEK 136

  Fly   347 PYQCQECKKSFTLKHHLLTHSRVHSRERPFVCQECGRAFPLKRHLVTHSKFHAGERPYVCEECGE 411
            ||.||.|.:||..|..|..|..:|:.|:|:.|.|||::|.:|..|..|.|.|.||:||.|:|||:
Zfish   137 PYTCQVCGRSFREKQILDKHLTIHTGEKPYSCPECGKSFRVKNCLENHIKIHTGEKPYTCQECGK 201

  Fly   412 SFAQENHLIMHSRFHGSLNPFVCAECGASFPRKFQLVNHGRIH-GKIPHSCTVCGKEFLQKRTLV 475
            ||.::.:|..|.|.|....||.|.|||.||..|..|..|.||| |:.|.||..|||.|.:.:.|.
Zfish   202 SFTEKQNLERHIRIHTGEKPFACPECGRSFRVKQDLKIHLRIHTGEKPFSCQQCGKSFSENKKLE 266

  Fly   476 SHMRRVHTGEQAHPCVSCGEGFLTKAELHQHVRTAHNGVNPNTSSATIIANQQLQQAHHHQAGQQ 540
            :|| |:||||:...|..||:.|..|..|..|:| .|.|..|                        
Zfish   267 NHM-RIHTGEKPFVCSHCGKNFRGKQNLESHMR-LHTGNQP------------------------ 305

  Fly   541 THPQTITVVSNPGNSTLLTVSTTDANGVARPQFVCRECGSAFNSREALALHLRLHTGDKSLMTDL 605
                                            :.|.:||.::|.:::|.:|:|.|||:|....|.
Zfish   306 --------------------------------YTCPQCGKSYNQQKSLQIHIRTHTGEKPFACDQ 338

  Fly   606 CALT----AALPGHF-LSTASLNPGTVVTANPNLVGQSPVPVQIISSTGQVMSQTTLVQAANSTH 665
            |..:    :.|.||. :.|                |:.|.                       |.
Zfish   339 CGKSFTQQSTLKGHIKIHT----------------GEKPF-----------------------TC 364

  Fly   666 PQAVVTAVPTMPVHGQQQHLQHVAQQQQQQQQQQQQQQQHVVSVAPANKPKSHFCASCGKGFAAK 730
            ||...:.:                    ::.:.::.::.|       :..|::.|..|.|.|..|
Zfish   365 PQCGKSFI--------------------EKTKLERHKKIH-------SGEKAYTCQHCKKSFTLK 402

  Fly   731 HGLMQHNRRHPNGGCTVRTHVC-ECGKAFFQKNHLMLHQRQHLETKPAI 778
            ..|..|.|.|..    .:.:.| :|||:|.:|..|:.|...|.|.|||:
Zfish   403 QSLDIHMRIHTG----EKLYTCQQCGKSFTEKQKLLSHMTVHTEEKPAL 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cgNP_001097306.2 COG5048 287..>371 CDD:227381 38/94 (40%)
C2H2 Zn finger 294..314 CDD:275368 10/19 (53%)
zf-H2C2_2 306..331 CDD:290200 13/24 (54%)
C2H2 Zn finger 322..342 CDD:275368 9/19 (47%)
C2H2 Zn finger 350..370 CDD:275368 8/19 (42%)
zf-H2C2_2 362..385 CDD:290200 9/22 (41%)
C2H2 Zn finger 378..398 CDD:275368 9/19 (47%)
zf-H2C2_2 390..415 CDD:290200 14/24 (58%)
C2H2 Zn finger 406..426 CDD:275368 9/19 (47%)
SIR2 <425..>465 CDD:294129 19/40 (48%)
C2H2 Zn finger 434..454 CDD:275368 10/19 (53%)
C2H2 Zn finger 461..482 CDD:275368 9/20 (45%)
C2H2 Zn finger 490..509 CDD:275368 7/18 (39%)
lambda-1 491..>603 CDD:212564 21/111 (19%)
C2H2 Zn finger 575..595 CDD:275368 7/19 (37%)
C2H2 Zn finger 720..740 CDD:275368 8/19 (42%)
C2H2 Zn finger 752..771 CDD:275368 8/19 (42%)
si:ch1073-127d16.1XP_021323944.1 COG5048 36..445 CDD:227381 154/536 (29%)
C2H2 Zn finger 56..76 CDD:275368 2/19 (11%)
C2H2 Zn finger 84..104 CDD:275368 10/19 (53%)
C2H2 Zn finger 112..132 CDD:275368 9/19 (47%)
C2H2 Zn finger 140..160 CDD:275368 8/19 (42%)
C2H2 Zn finger 168..188 CDD:275368 9/19 (47%)
C2H2 Zn finger 196..216 CDD:275368 9/19 (47%)
C2H2 Zn finger 224..244 CDD:275368 10/19 (53%)
C2H2 Zn finger 252..272 CDD:275368 9/20 (45%)
C2H2 Zn finger 280..300 CDD:275368 8/20 (40%)
C2H2 Zn finger 308..328 CDD:275368 7/19 (37%)
C2H2 Zn finger 336..356 CDD:275368 5/19 (26%)
C2H2 Zn finger 364..384 CDD:275368 2/39 (5%)
C2H2 Zn finger 392..412 CDD:275368 8/19 (42%)
C2H2 Zn finger 420..440 CDD:275368 8/19 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595224
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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