DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpS16 and mrps16

DIOPT Version :10

Sequence 1:NP_523737.1 Gene:mRpS16 / 36570 FlyBaseID:FBgn0033907 Length:129 Species:Drosophila melanogaster
Sequence 2:NP_001016347.1 Gene:mrps16 / 549101 XenbaseID:XB-GENE-5805277 Length:141 Species:Xenopus tropicalis


Alignment Length:119 Identity:54/119 - (45%)
Similarity:75/119 - (63%) Gaps:5/119 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 YAKSAKIIRFVRLGCTNRPFYHIVVMERRKNQHQPVIEQVGSFDPLPNDYNERLVALNTERIRYW 77
            |.|....||....||||||||.||....::.:....:||:|::||:||.|||:||:||.|:|:||
 Frog    12 YHKGHVAIRLALAGCTNRPFYRIVAAHNKRARDGKYLEQLGTYDPMPNIYNEKLVSLNIEQIKYW 76

  Fly    78 LGKGAHLSTPAAELLGIAGLLPIHPRTYMTAWRNRR-----TAAEAEASPEKAE 126
            :|.|||.:.|.|:|||:||..|:||.|...|.|.:|     :.|||..:.:..|
 Frog    77 IGCGAHTTKPVAKLLGLAGFFPLHPMTITNAERLKREKEKQSNAEAPLTLDSKE 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpS16NP_523737.1 Ribosomal_S16 24..85 CDD:459981 32/60 (53%)
mrps16NP_001016347.1 S16 17..97 CDD:272848 41/79 (52%)

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