DRSC/TRiP Functional Genomics Resources

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Protein Alignment ReepB and HVA22B

DIOPT Version :10

Sequence 1:NP_610936.2 Gene:ReepB / 36569 FlyBaseID:FBgn0033906 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_201055.1 Gene:HVA22B / 836369 AraportID:AT5G62490 Length:167 Species:Arabidopsis thaliana


Alignment Length:109 Identity:37/109 - (33%)
Similarity:51/109 - (46%) Gaps:5/109 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 IIGVLYPAYISIHAIESSTKQDDTKWLIYWVTFGIFTVIEFFSSLLTSVIPFYWLLKCAFLIWCM 133
            :|.::||.|.|:.||||.:..||.:||.||..:.:..:.|.....|...||.|...|.|...|.:
plant    23 VISLVYPLYASVRAIESRSHGDDKQWLTYWALYSLIKLFELTFFRLLEWIPLYPYAKLALTSWLV 87

  Fly   134 LPTEQNGSTIIYNKLVRPYFLKHHE----SVDRIIDDGMKKAAG 173
            || ..||:..:|...||.:.|..|.    .|....||.:...||
plant    88 LP-GMNGAAYLYEHYVRSFLLSPHTVNVWYVPAKKDDDLGATAG 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ReepBNP_610936.2 TB2_DP1_HVA22 75..152 CDD:460820 28/76 (37%)
HVA22BNP_201055.1 TB2_DP1_HVA22 29..105 CDD:460820 28/76 (37%)

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