DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ReepB and HVA22J

DIOPT Version :9

Sequence 1:NP_001188928.1 Gene:ReepB / 36569 FlyBaseID:FBgn0033906 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_565832.1 Gene:HVA22J / 818175 AraportID:AT2G36020 Length:258 Species:Arabidopsis thaliana


Alignment Length:104 Identity:29/104 - (27%)
Similarity:49/104 - (47%) Gaps:5/104 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 QLLCNIIGVLYPAYISIHAIESSTKQDDTK---WLIYWVTFGIFTVIEFFSSLLTSVIPFYWLLK 125
            :||..|:|..|||:.....:|.: |.|..:   |..||:...:.:..|.......|.:|.|..:|
plant     8 RLLVLILGYTYPAFECFKTVEKN-KVDIEELRFWCQYWILLALISSFERVGDFFISWLPLYGEMK 71

  Fly   126 CAFLIWCMLPTEQNGSTIIYNKLVRPYFLKHHESVDRII 164
            ..|.::...| :..|:..:|..|::||..:|...:||.|
plant    72 VVFFVYLWYP-KTKGTRHVYETLLKPYMAQHETEIDRKI 109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ReepBNP_001188928.1 TB2_DP1_HVA22 63..151 CDD:281172 23/89 (26%)
HVA22JNP_565832.1 TB2_DP1_HVA22 19..97 CDD:397309 18/79 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1473891at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.